Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.2■□□□□ 0.02
SMIM4Q8WVI0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 KSR1P1-201ENST00000446298 240 ntBASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 AL353708.3-201ENST00000610272 989 ntBASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 AC130371.2-201ENST00000619443 611 ntBASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 AC009949.1-201ENST00000623048 1830 ntBASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM4Q8WVI0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 TSPY6P-201ENST00000448518 926 ntBASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms