Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRFBP1Q8NEF9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRFBP1Q8NEF9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRFBP1Q8NEF9 AC068880.1-201ENST00000507289 2297 ntBASIC16.98■□□□□ 0.31
SRFBP1Q8NEF9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 AC096633.1-201ENST00000422446 749 ntBASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 AC134043.2-201ENST00000624206 2238 ntBASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRFBP1Q8NEF9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 BX276092.7-203ENST00000637198 1536 ntBASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 AL358472.4-201ENST00000633140 710 ntBASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRFBP1Q8NEF9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SRFBP1Q8NEF9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.3
SRFBP1Q8NEF9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.96■□□□□ 0.3
SRFBP1Q8NEF9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRFBP1Q8NEF9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRFBP1Q8NEF9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRFBP1Q8NEF9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRFBP1Q8NEF9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 AC069148.1-201ENST00000608741 768 ntBASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 AC009949.1-201ENST00000623048 1830 ntBASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 KRT18P1-202ENST00000452408 1331 ntBASIC16.95■□□□□ 0.3
SRFBP1Q8NEF9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms