Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 PHGDH-209ENST00000641074 1780 ntBASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL1Q6NVV3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 TSSC2-201ENST00000450217 709 ntBASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 VENTXP7-201ENST00000475503 772 ntBASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL1Q6NVV3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 LINC00167-201ENST00000530583 1419 ntBASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NIPAL1Q6NVV3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms