Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CRYGEP-201ENST00000412192 528 ntBASIC17■□□□□ 0.31
CLDN6P56747 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
CLDN6P56747 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLDN6P56747 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17■□□□□ 0.31
CLDN6P56747 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
CLDN6P56747 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17■□□□□ 0.31
CLDN6P56747 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
CLDN6P56747 AD001527.2-201ENST00000622994 785 ntBASIC17■□□□□ 0.31
CLDN6P56747 AC073592.4-201ENST00000623827 446 ntBASIC17■□□□□ 0.31
CLDN6P56747 AC073592.5-201ENST00000624854 528 ntBASIC17■□□□□ 0.31
CLDN6P56747 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17■□□□□ 0.31
CLDN6P56747 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN6P56747 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLDN6P56747 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLDN6P56747 AC148477.5-201ENST00000625164 1645 ntBASIC16.99■□□□□ 0.31
CLDN6P56747 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CLDN6P56747 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLDN6P56747 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLDN6P56747 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN6P56747 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN6P56747 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN6P56747 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.99■□□□□ 0.31
CLDN6P56747 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.99■□□□□ 0.31
CLDN6P56747 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN6P56747 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN6P56747 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN6P56747 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN6P56747 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN6P56747 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CLDN6P56747 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN6P56747 KRT8P47-201ENST00000604727 1398 ntBASIC16.99■□□□□ 0.31
CLDN6P56747 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN6P56747 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN6P56747 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN6P56747 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN6P56747 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.98■□□□□ 0.31
CLDN6P56747 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CLDN6P56747 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 CEND1P1-201ENST00000451006 455 ntBASIC16.98■□□□□ 0.31
CLDN6P56747 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CLDN6P56747 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CLDN6P56747 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CLDN6P56747 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CLDN6P56747 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN6P56747 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN6P56747 AC002310.6-201ENST00000624451 1377 ntBASIC16.98■□□□□ 0.31
CLDN6P56747 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CLDN6P56747 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN6P56747 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLDN6P56747 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CLDN6P56747 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CLDN6P56747 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.97■□□□□ 0.31
CLDN6P56747 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN6P56747 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 AC254562.1-201ENST00000417586 456 ntBASIC16.97■□□□□ 0.31
CLDN6P56747 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.97■□□□□ 0.31
CLDN6P56747 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms