Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
KNTC1P50748 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.81■□□□□ 0.28
KNTC1P50748 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.81■□□□□ 0.28
KNTC1P50748 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.81■□□□□ 0.28
KNTC1P50748 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.81■□□□□ 0.28
KNTC1P50748 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KNTC1P50748 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KNTC1P50748 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KNTC1P50748 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KNTC1P50748 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KNTC1P50748 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KNTC1P50748 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KNTC1P50748 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KNTC1P50748 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KNTC1P50748 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KNTC1P50748 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KNTC1P50748 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
KNTC1P50748 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.81■□□□□ 0.28
KNTC1P50748 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KNTC1P50748 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.81■□□□□ 0.28
KNTC1P50748 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.81■□□□□ 0.28
KNTC1P50748 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.81■□□□□ 0.28
KNTC1P50748 AC008667.4-201ENST00000607370 168 ntBASIC16.81■□□□□ 0.28
KNTC1P50748 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.81■□□□□ 0.28
KNTC1P50748 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KNTC1P50748 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.81■□□□□ 0.28
KNTC1P50748 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KNTC1P50748 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KNTC1P50748 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KNTC1P50748 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 IGHV3-65-201ENST00000523210 341 ntBASIC16.8■□□□□ 0.28
KNTC1P50748 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.8■□□□□ 0.28
KNTC1P50748 AC073592.5-201ENST00000624854 528 ntBASIC16.8■□□□□ 0.28
KNTC1P50748 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
KNTC1P50748 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.8■□□□□ 0.28
KNTC1P50748 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
KNTC1P50748 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KNTC1P50748 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.8■□□□□ 0.28
KNTC1P50748 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KNTC1P50748 AC004461.1-201ENST00000412461 403 ntBASIC16.8■□□□□ 0.28
KNTC1P50748 OR7E47P-204ENST00000575924 449 ntBASIC16.8■□□□□ 0.28
KNTC1P50748 AC007064.4-201ENST00000637740 555 ntBASIC16.8■□□□□ 0.28
KNTC1P50748 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
KNTC1P50748 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KNTC1P50748 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KNTC1P50748 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KNTC1P50748 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.79■□□□□ 0.28
KNTC1P50748 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.79■□□□□ 0.28
KNTC1P50748 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
KNTC1P50748 AL049757.1-201ENST00000616842 1596 ntBASIC16.79■□□□□ 0.28
KNTC1P50748 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.79■□□□□ 0.28
KNTC1P50748 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
KNTC1P50748 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KNTC1P50748 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.79■□□□□ 0.28
KNTC1P50748 AC023141.5-201ENST00000458585 616 ntBASIC16.79■□□□□ 0.28
KNTC1P50748 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
KNTC1P50748 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KNTC1P50748 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KNTC1P50748 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KNTC1P50748 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.79■□□□□ 0.28
KNTC1P50748 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KNTC1P50748 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KNTC1P50748 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.79■□□□□ 0.28
KNTC1P50748 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KNTC1P50748 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KNTC1P50748 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KNTC1P50748 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KNTC1P50748 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KNTC1P50748 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.78■□□□□ 0.28
KNTC1P50748 MRPL20P1-201ENST00000400819 433 ntBASIC16.78■□□□□ 0.28
KNTC1P50748 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KNTC1P50748 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KNTC1P50748 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.78■□□□□ 0.28
KNTC1P50748 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
KNTC1P50748 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KNTC1P50748 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KNTC1P50748 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.78■□□□□ 0.28
KNTC1P50748 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KNTC1P50748 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KNTC1P50748 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.78■□□□□ 0.28
KNTC1P50748 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KNTC1P50748 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.78■□□□□ 0.28
KNTC1P50748 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.78■□□□□ 0.28
KNTC1P50748 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.78■□□□□ 0.28
KNTC1P50748 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms