Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
APPP05067 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
APPP05067 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.32■■□□□ 1
APPP05067 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.32■■□□□ 1
APPP05067 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.32■■□□□ 1
APPP05067 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APPP05067 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APPP05067 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APPP05067 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.32■■□□□ 1
APPP05067 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.32■■□□□ 1
APPP05067 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.32■■□□□ 1
APPP05067 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.32■■□□□ 1
APPP05067 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.32■■□□□ 1
APPP05067 AC091304.2-201ENST00000564639 760 ntBASIC21.32■■□□□ 1
APPP05067 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.32■■□□□ 1
APPP05067 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.32■■□□□ 1
APPP05067 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.32■■□□□ 1
APPP05067 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
APPP05067 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APPP05067 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.32■■□□□ 1
APPP05067 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
APPP05067 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
APPP05067 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
APPP05067 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.31■■□□□ 1
APPP05067 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
APPP05067 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.31■■□□□ 1
APPP05067 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.31■■□□□ 1
APPP05067 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.31■■□□□ 1
APPP05067 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.31■■□□□ 1
APPP05067 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.31■■□□□ 1
APPP05067 AC009533.2-201ENST00000543664 586 ntBASIC21.31■■□□□ 1
APPP05067 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.31■■□□□ 1
APPP05067 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.31■■□□□ 1
APPP05067 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.31■■□□□ 1
APPP05067 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.31■■□□□ 1
APPP05067 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.31■■□□□ 1
APPP05067 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.31■■□□□ 1
APPP05067 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
APPP05067 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
APPP05067 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APPP05067 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APPP05067 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
APPP05067 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.3■■□□□ 1
APPP05067 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APPP05067 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.3■■□□□ 1
APPP05067 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
APPP05067 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.3■■□□□ 1
APPP05067 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.3■■□□□ 1
APPP05067 TSPY19P-201ENST00000418461 509 ntBASIC21.3■■□□□ 1
APPP05067 POM121L3P-201ENST00000419331 1163 ntBASIC21.3■■□□□ 1
APPP05067 AL450487.1-201ENST00000426799 995 ntBASIC21.3■■□□□ 1
APPP05067 TSPY18P-201ENST00000441642 509 ntBASIC21.3■■□□□ 1
APPP05067 KRT18P31-201ENST00000506277 1292 ntBASIC21.3■■□□□ 1
APPP05067 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.3■■□□□ 1
APPP05067 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
APPP05067 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.3■■□□□ 1
APPP05067 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.3■■□□□ 1
APPP05067 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.3■■□□□ 1
APPP05067 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.3■■□□□ 1
APPP05067 AC116407.2-201ENST00000613639 860 ntBASIC21.3■■□□□ 1
APPP05067 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.3■■□□□ 1
APPP05067 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.3■■□□□ 1
APPP05067 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.3■■□□□ 1
APPP05067 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
APPP05067 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.3■■□□□ 1
APPP05067 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
APPP05067 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APPP05067 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
APPP05067 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.29■■□□□ 1
APPP05067 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.29■■□□□ 1
APPP05067 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APPP05067 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
APPP05067 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
APPP05067 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.29■■□□□ 1
APPP05067 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.29■■□□□ 1
APPP05067 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APPP05067 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APPP05067 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APPP05067 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
APPP05067 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APPP05067 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
APPP05067 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.29■■□□□ 1
APPP05067 RCN1P2-201ENST00000398357 915 ntBASIC21.29■■□□□ 1
APPP05067 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
APPP05067 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.29■■□□□ 1
APPP05067 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms