Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 SLC25A24-204ENST00000569674 2357 ntBASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 IGHV3-52-201ENST00000519770 353 ntBASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 SNHG9-202ENST00000564014 471 ntBASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 AC010654.1-201ENST00000615722 808 ntBASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 AC093677.2-201ENST00000600169 1863 ntBASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 KRT18P28-201ENST00000453838 1332 ntBASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS4Q8IUM7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 MRPL20P1-201ENST00000400819 433 ntBASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 AC254562.1-201ENST00000417586 456 ntBASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 AL513190.1-201ENST00000621254 727 ntBASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 GPR89P-201ENST00000407924 1495 ntBASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS4Q8IUM7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 HTR5BP-201ENST00000430851 1154 ntBASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 MKNK2P1-201ENST00000437526 628 ntBASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS4Q8IUM7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms