Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RAB5BP61020 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RAB5BP61020 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB5BP61020 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RAB5BP61020 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
RAB5BP61020 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RAB5BP61020 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RAB5BP61020 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
RAB5BP61020 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB5BP61020 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RAB5BP61020 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB5BP61020 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.94□□□□□ -0.18
RAB5BP61020 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RAB5BP61020 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 AL356652.1-201ENST00000615962 565 ntBASIC13.94□□□□□ -0.18
RAB5BP61020 AL358852.1-201ENST00000623174 1268 ntBASIC13.94□□□□□ -0.18
RAB5BP61020 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB5BP61020 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB5BP61020 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB5BP61020 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.94□□□□□ -0.18
RAB5BP61020 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB5BP61020 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RAB5BP61020 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB5BP61020 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB5BP61020 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RAB5BP61020 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB5BP61020 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB5BP61020 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAB5BP61020 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.93□□□□□ -0.18
RAB5BP61020 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.93□□□□□ -0.18
RAB5BP61020 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RAB5BP61020 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.93□□□□□ -0.18
RAB5BP61020 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB5BP61020 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.93□□□□□ -0.18
RAB5BP61020 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB5BP61020 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
RAB5BP61020 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 AC104417.2-201ENST00000562989 1793 ntBASIC13.93□□□□□ -0.18
RAB5BP61020 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB5BP61020 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.93□□□□□ -0.18
RAB5BP61020 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RAB5BP61020 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
RAB5BP61020 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB5BP61020 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB5BP61020 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB5BP61020 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RAB5BP61020 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB5BP61020 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB5BP61020 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB5BP61020 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB5BP61020 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RAB5BP61020 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB5BP61020 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB5BP61020 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB5BP61020 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms