Protein–RNA interactions for Protein: J3QR89

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 54 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
J3QR89 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
J3QR89 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC11.97□□□□□ -0.49
J3QR89 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
J3QR89 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
J3QR89 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.97□□□□□ -0.49
J3QR89 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC11.97□□□□□ -0.49
J3QR89 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC11.97□□□□□ -0.49
J3QR89 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
J3QR89 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
J3QR89 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
J3QR89 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC11.97□□□□□ -0.49
J3QR89 DUX4L28-201ENST00000623687 678 ntBASIC11.97□□□□□ -0.49
J3QR89 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC11.97□□□□□ -0.49
J3QR89 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
J3QR89 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
J3QR89 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.97□□□□□ -0.49
J3QR89 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC11.97□□□□□ -0.49
J3QR89 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.97□□□□□ -0.49
J3QR89 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
J3QR89 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 TNRC18P2-201ENST00000417666 2714 ntBASIC11.96□□□□□ -0.49
J3QR89 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC11.96□□□□□ -0.49
J3QR89 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC11.96□□□□□ -0.49
J3QR89 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
J3QR89 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
J3QR89 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC11.96□□□□□ -0.49
J3QR89 AL157400.5-201ENST00000507624 621 ntBASIC11.96□□□□□ -0.49
J3QR89 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC11.96□□□□□ -0.49
J3QR89 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
J3QR89 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC11.96□□□□□ -0.49
J3QR89 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
J3QR89 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
J3QR89 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
J3QR89 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
J3QR89 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC11.96□□□□□ -0.5
J3QR89 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
J3QR89 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
J3QR89 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
J3QR89 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
J3QR89 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
J3QR89 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
J3QR89 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.96□□□□□ -0.5
J3QR89 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
J3QR89 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.96□□□□□ -0.5
J3QR89 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.96□□□□□ -0.5
J3QR89 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
J3QR89 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
J3QR89 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
J3QR89 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
J3QR89 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
J3QR89 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
J3QR89 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
J3QR89 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
J3QR89 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC11.95□□□□□ -0.5
J3QR89 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
J3QR89 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC11.95□□□□□ -0.5
J3QR89 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
J3QR89 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
J3QR89 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
J3QR89 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.95□□□□□ -0.5
J3QR89 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
J3QR89 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC11.95□□□□□ -0.5
J3QR89 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
J3QR89 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
J3QR89 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC11.95□□□□□ -0.5
J3QR89 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.95□□□□□ -0.5
J3QR89 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
J3QR89 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
J3QR89 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
J3QR89 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms