Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SPCS1Q9Y6A9 DUSP8P4-201ENST00000399538 1761 ntBASIC16.97■□□□□ 0.31
SPCS1Q9Y6A9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPCS1Q9Y6A9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPCS1Q9Y6A9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.96■□□□□ 0.31
SPCS1Q9Y6A9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPCS1Q9Y6A9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC16.96■□□□□ 0.31
SPCS1Q9Y6A9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPCS1Q9Y6A9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SPCS1Q9Y6A9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SPCS1Q9Y6A9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS1Q9Y6A9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS1Q9Y6A9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS1Q9Y6A9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS1Q9Y6A9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPCS1Q9Y6A9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPCS1Q9Y6A9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.94■□□□□ 0.3
SPCS1Q9Y6A9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPCS1Q9Y6A9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPCS1Q9Y6A9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.94■□□□□ 0.3
SPCS1Q9Y6A9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPCS1Q9Y6A9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPCS1Q9Y6A9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPCS1Q9Y6A9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPCS1Q9Y6A9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.93■□□□□ 0.3
SPCS1Q9Y6A9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPCS1Q9Y6A9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPCS1Q9Y6A9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPCS1Q9Y6A9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS1Q9Y6A9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.92■□□□□ 0.3
SPCS1Q9Y6A9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
SPCS1Q9Y6A9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS1Q9Y6A9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.92■□□□□ 0.3
SPCS1Q9Y6A9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS1Q9Y6A9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS1Q9Y6A9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS1Q9Y6A9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.92■□□□□ 0.3
SPCS1Q9Y6A9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.92■□□□□ 0.3
SPCS1Q9Y6A9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS1Q9Y6A9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPCS1Q9Y6A9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPCS1Q9Y6A9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SPCS1Q9Y6A9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPCS1Q9Y6A9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPCS1Q9Y6A9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.91■□□□□ 0.3
SPCS1Q9Y6A9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPCS1Q9Y6A9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS1Q9Y6A9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SPCS1Q9Y6A9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.9■□□□□ 0.3
SPCS1Q9Y6A9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS1Q9Y6A9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS1Q9Y6A9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS1Q9Y6A9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS1Q9Y6A9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS1Q9Y6A9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SPCS1Q9Y6A9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS1Q9Y6A9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS1Q9Y6A9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SPCS1Q9Y6A9 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SPCS1Q9Y6A9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SPCS1Q9Y6A9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
SPCS1Q9Y6A9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
SPCS1Q9Y6A9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS1Q9Y6A9 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC16.89■□□□□ 0.29
SPCS1Q9Y6A9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SPCS1Q9Y6A9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.88■□□□□ 0.29
SPCS1Q9Y6A9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPCS1Q9Y6A9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPCS1Q9Y6A9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SPCS1Q9Y6A9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SPCS1Q9Y6A9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SPCS1Q9Y6A9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS1Q9Y6A9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS1Q9Y6A9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS1Q9Y6A9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS1Q9Y6A9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS1Q9Y6A9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC16.87■□□□□ 0.29
SPCS1Q9Y6A9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SPCS1Q9Y6A9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS1Q9Y6A9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS1Q9Y6A9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS1Q9Y6A9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS1Q9Y6A9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS1Q9Y6A9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SPCS1Q9Y6A9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS1Q9Y6A9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS1Q9Y6A9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.86■□□□□ 0.29
SPCS1Q9Y6A9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.86■□□□□ 0.29
SPCS1Q9Y6A9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SPCS1Q9Y6A9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPCS1Q9Y6A9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.85■□□□□ 0.29
SPCS1Q9Y6A9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS1Q9Y6A9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS1Q9Y6A9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS1Q9Y6A9 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SPCS1Q9Y6A9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS1Q9Y6A9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS1Q9Y6A9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.84■□□□□ 0.29
SPCS1Q9Y6A9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS1Q9Y6A9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms