Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HS3ST3A1Q9Y663 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
HS3ST3A1Q9Y663 SPCS2P3-201ENST00000500401 656 ntBASIC24.34■■□□□ 1.49
HS3ST3A1Q9Y663 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HS3ST3A1Q9Y663 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
HS3ST3A1Q9Y663 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
HS3ST3A1Q9Y663 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
HS3ST3A1Q9Y663 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
HS3ST3A1Q9Y663 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HS3ST3A1Q9Y663 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HS3ST3A1Q9Y663 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.33■■□□□ 1.49
HS3ST3A1Q9Y663 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.32■■□□□ 1.48
HS3ST3A1Q9Y663 AC139426.1-201ENST00000568218 2529 ntBASIC24.32■■□□□ 1.48
HS3ST3A1Q9Y663 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.32■■□□□ 1.48
HS3ST3A1Q9Y663 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.32■■□□□ 1.48
HS3ST3A1Q9Y663 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
HS3ST3A1Q9Y663 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
HS3ST3A1Q9Y663 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
HS3ST3A1Q9Y663 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.31■■□□□ 1.48
HS3ST3A1Q9Y663 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.31■■□□□ 1.48
HS3ST3A1Q9Y663 AC018755.3-202ENST00000596210 929 ntBASIC24.31■■□□□ 1.48
HS3ST3A1Q9Y663 MIR6765-201ENST00000614092 87 ntBASIC24.31■■□□□ 1.48
HS3ST3A1Q9Y663 AC074183.2-201ENST00000623112 922 ntBASIC24.31■■□□□ 1.48
HS3ST3A1Q9Y663 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
HS3ST3A1Q9Y663 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.3■■□□□ 1.48
HS3ST3A1Q9Y663 RARRES2P1-201ENST00000474487 481 ntBASIC24.3■■□□□ 1.48
HS3ST3A1Q9Y663 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.3■■□□□ 1.48
HS3ST3A1Q9Y663 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HS3ST3A1Q9Y663 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
HS3ST3A1Q9Y663 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.3■■□□□ 1.48
HS3ST3A1Q9Y663 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
HS3ST3A1Q9Y663 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
HS3ST3A1Q9Y663 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
HS3ST3A1Q9Y663 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HS3ST3A1Q9Y663 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
HS3ST3A1Q9Y663 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
HS3ST3A1Q9Y663 LINC01003-201ENST00000564834 1764 ntBASIC24.29■■□□□ 1.48
HS3ST3A1Q9Y663 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
HS3ST3A1Q9Y663 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
HS3ST3A1Q9Y663 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HS3ST3A1Q9Y663 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.28■■□□□ 1.48
HS3ST3A1Q9Y663 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HS3ST3A1Q9Y663 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
HS3ST3A1Q9Y663 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.27■■□□□ 1.48
HS3ST3A1Q9Y663 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
HS3ST3A1Q9Y663 BHLHE23-202ENST00000612929 1109 ntBASIC24.27■■□□□ 1.48
HS3ST3A1Q9Y663 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
HS3ST3A1Q9Y663 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
HS3ST3A1Q9Y663 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.26■■□□□ 1.47
HS3ST3A1Q9Y663 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
HS3ST3A1Q9Y663 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
HS3ST3A1Q9Y663 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.25■■□□□ 1.47
HS3ST3A1Q9Y663 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.25■■□□□ 1.47
HS3ST3A1Q9Y663 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
HS3ST3A1Q9Y663 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
HS3ST3A1Q9Y663 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
HS3ST3A1Q9Y663 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.24■■□□□ 1.47
HS3ST3A1Q9Y663 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
HS3ST3A1Q9Y663 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
HS3ST3A1Q9Y663 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.24■■□□□ 1.47
HS3ST3A1Q9Y663 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.23■■□□□ 1.47
HS3ST3A1Q9Y663 AC139795.1-202ENST00000500444 432 ntBASIC24.23■■□□□ 1.47
HS3ST3A1Q9Y663 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.23■■□□□ 1.47
HS3ST3A1Q9Y663 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HS3ST3A1Q9Y663 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
HS3ST3A1Q9Y663 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HS3ST3A1Q9Y663 AL449106.1-201ENST00000608517 1980 ntBASIC24.23■■□□□ 1.47
HS3ST3A1Q9Y663 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
HS3ST3A1Q9Y663 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
HS3ST3A1Q9Y663 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
HS3ST3A1Q9Y663 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.22■■□□□ 1.47
HS3ST3A1Q9Y663 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.22■■□□□ 1.47
HS3ST3A1Q9Y663 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
HS3ST3A1Q9Y663 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
HS3ST3A1Q9Y663 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
HS3ST3A1Q9Y663 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
HS3ST3A1Q9Y663 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.21■■□□□ 1.47
HS3ST3A1Q9Y663 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.21■■□□□ 1.47
HS3ST3A1Q9Y663 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
HS3ST3A1Q9Y663 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
HS3ST3A1Q9Y663 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
HS3ST3A1Q9Y663 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HS3ST3A1Q9Y663 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
HS3ST3A1Q9Y663 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
HS3ST3A1Q9Y663 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.19■■□□□ 1.46
HS3ST3A1Q9Y663 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
HS3ST3A1Q9Y663 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
HS3ST3A1Q9Y663 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
HS3ST3A1Q9Y663 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
HS3ST3A1Q9Y663 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
HS3ST3A1Q9Y663 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.18■■□□□ 1.46
HS3ST3A1Q9Y663 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.18■■□□□ 1.46
HS3ST3A1Q9Y663 AC010980.1-201ENST00000587192 1142 ntBASIC24.18■■□□□ 1.46
HS3ST3A1Q9Y663 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.18■■□□□ 1.46
HS3ST3A1Q9Y663 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
HS3ST3A1Q9Y663 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
HS3ST3A1Q9Y663 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.17■■□□□ 1.46
HS3ST3A1Q9Y663 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
HS3ST3A1Q9Y663 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.17■■□□□ 1.46
HS3ST3A1Q9Y663 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms