Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA11Q9Y5H2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA11Q9Y5H2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHGA11Q9Y5H2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA11Q9Y5H2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA11Q9Y5H2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA11Q9Y5H2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHGA11Q9Y5H2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PCDHGA11Q9Y5H2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA11Q9Y5H2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA11Q9Y5H2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA11Q9Y5H2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA11Q9Y5H2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA11Q9Y5H2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA11Q9Y5H2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA11Q9Y5H2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDHGA11Q9Y5H2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA11Q9Y5H2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA11Q9Y5H2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA11Q9Y5H2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA11Q9Y5H2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHGA11Q9Y5H2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA11Q9Y5H2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA11Q9Y5H2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA11Q9Y5H2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.68■■□□□ 1.38
PCDHGA11Q9Y5H2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
PCDHGA11Q9Y5H2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHGA11Q9Y5H2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA11Q9Y5H2 AL359258.2-201ENST00000564063 1566 ntBASIC23.67■■□□□ 1.38
PCDHGA11Q9Y5H2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA11Q9Y5H2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA11Q9Y5H2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA11Q9Y5H2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHGA11Q9Y5H2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA11Q9Y5H2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA11Q9Y5H2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA11Q9Y5H2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.66■■□□□ 1.38
PCDHGA11Q9Y5H2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHGA11Q9Y5H2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHGA11Q9Y5H2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
PCDHGA11Q9Y5H2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA11Q9Y5H2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHGA11Q9Y5H2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PCDHGA11Q9Y5H2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA11Q9Y5H2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA11Q9Y5H2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGA11Q9Y5H2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.64■■□□□ 1.37
PCDHGA11Q9Y5H2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGA11Q9Y5H2 AC126177.7-201ENST00000547904 679 ntBASIC23.64■■□□□ 1.37
PCDHGA11Q9Y5H2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGA11Q9Y5H2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGA11Q9Y5H2 AC091060.1-201ENST00000623524 1766 ntBASIC23.63■■□□□ 1.37
PCDHGA11Q9Y5H2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA11Q9Y5H2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA11Q9Y5H2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.63■■□□□ 1.37
PCDHGA11Q9Y5H2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA11Q9Y5H2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA11Q9Y5H2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA11Q9Y5H2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGA11Q9Y5H2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGA11Q9Y5H2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
PCDHGA11Q9Y5H2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
PCDHGA11Q9Y5H2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHGA11Q9Y5H2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA11Q9Y5H2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHGA11Q9Y5H2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA11Q9Y5H2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHGA11Q9Y5H2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
PCDHGA11Q9Y5H2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA11Q9Y5H2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA11Q9Y5H2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA11Q9Y5H2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA11Q9Y5H2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.6■■□□□ 1.37
PCDHGA11Q9Y5H2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.6■■□□□ 1.37
PCDHGA11Q9Y5H2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA11Q9Y5H2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA11Q9Y5H2 MIR639-201ENST00000384974 98 ntBASIC23.59■■□□□ 1.37
PCDHGA11Q9Y5H2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDHGA11Q9Y5H2 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHGA11Q9Y5H2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA11Q9Y5H2 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHGA11Q9Y5H2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
PCDHGA11Q9Y5H2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA11Q9Y5H2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGA11Q9Y5H2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHGA11Q9Y5H2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGA11Q9Y5H2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHGA11Q9Y5H2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
PCDHGA11Q9Y5H2 AC145676.1-201ENST00000514988 2004 ntBASIC23.57■■□□□ 1.36
PCDHGA11Q9Y5H2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA11Q9Y5H2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA11Q9Y5H2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
PCDHGA11Q9Y5H2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA11Q9Y5H2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHGA11Q9Y5H2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA11Q9Y5H2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA11Q9Y5H2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA11Q9Y5H2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA11Q9Y5H2 AC092803.2-201ENST00000564287 1899 ntBASIC23.56■■□□□ 1.36
PCDHGA11Q9Y5H2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms