Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 MIR762-201ENST00000390236 83 ntBASIC22.34■■□□□ 1.17
PCDHGB1Q9Y5G3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGB1Q9Y5G3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGB1Q9Y5G3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.34■■□□□ 1.17
PCDHGB1Q9Y5G3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGB1Q9Y5G3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDHGB1Q9Y5G3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGB1Q9Y5G3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PCDHGB1Q9Y5G3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGB1Q9Y5G3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGB1Q9Y5G3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGB1Q9Y5G3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB1Q9Y5G3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB1Q9Y5G3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB1Q9Y5G3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB1Q9Y5G3 AC012676.1-201ENST00000574705 1949 ntBASIC22.32■■□□□ 1.16
PCDHGB1Q9Y5G3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHGB1Q9Y5G3 AP006261.1-201ENST00000584783 668 ntBASIC22.32■■□□□ 1.16
PCDHGB1Q9Y5G3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDHGB1Q9Y5G3 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.32■■□□□ 1.16
PCDHGB1Q9Y5G3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDHGB1Q9Y5G3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB1Q9Y5G3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB1Q9Y5G3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDHGB1Q9Y5G3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.31■■□□□ 1.16
PCDHGB1Q9Y5G3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB1Q9Y5G3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHGB1Q9Y5G3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB1Q9Y5G3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHGB1Q9Y5G3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
PCDHGB1Q9Y5G3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB1Q9Y5G3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB1Q9Y5G3 AL139125.2-201ENST00000623134 1869 ntBASIC22.3■■□□□ 1.16
PCDHGB1Q9Y5G3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB1Q9Y5G3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB1Q9Y5G3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB1Q9Y5G3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB1Q9Y5G3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB1Q9Y5G3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB1Q9Y5G3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB1Q9Y5G3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHGB1Q9Y5G3 WHAMMP2-203ENST00000563942 1603 ntBASIC22.28■■□□□ 1.16
PCDHGB1Q9Y5G3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB1Q9Y5G3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB1Q9Y5G3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB1Q9Y5G3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB1Q9Y5G3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGB1Q9Y5G3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.27■■□□□ 1.16
PCDHGB1Q9Y5G3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PCDHGB1Q9Y5G3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB1Q9Y5G3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHGB1Q9Y5G3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.27■■□□□ 1.16
PCDHGB1Q9Y5G3 AC108673.1-201ENST00000510422 1159 ntBASIC22.27■■□□□ 1.16
PCDHGB1Q9Y5G3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB1Q9Y5G3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB1Q9Y5G3 AC133561.1-201ENST00000568600 2415 ntBASIC22.27■■□□□ 1.16
PCDHGB1Q9Y5G3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHGB1Q9Y5G3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB1Q9Y5G3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB1Q9Y5G3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB1Q9Y5G3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB1Q9Y5G3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB1Q9Y5G3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PCDHGB1Q9Y5G3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB1Q9Y5G3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB1Q9Y5G3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHGB1Q9Y5G3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.25■■□□□ 1.15
PCDHGB1Q9Y5G3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PCDHGB1Q9Y5G3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB1Q9Y5G3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHGB1Q9Y5G3 LINC00273-201ENST00000539813 1452 ntBASIC22.24■■□□□ 1.15
PCDHGB1Q9Y5G3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB1Q9Y5G3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB1Q9Y5G3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGB1Q9Y5G3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB1Q9Y5G3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB1Q9Y5G3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB1Q9Y5G3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
PCDHGB1Q9Y5G3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB1Q9Y5G3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB1Q9Y5G3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB1Q9Y5G3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB1Q9Y5G3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB1Q9Y5G3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGB1Q9Y5G3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGB1Q9Y5G3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB1Q9Y5G3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB1Q9Y5G3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB1Q9Y5G3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
PCDHGB1Q9Y5G3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.21■■□□□ 1.15
PCDHGB1Q9Y5G3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB1Q9Y5G3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB1Q9Y5G3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB1Q9Y5G3 AC142472.1-201ENST00000612013 1741 ntBASIC22.2■■□□□ 1.14
PCDHGB1Q9Y5G3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGB1Q9Y5G3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGB1Q9Y5G3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PCDHGB1Q9Y5G3 AC005559.1-201ENST00000589661 871 ntBASIC22.2■■□□□ 1.14
PCDHGB1Q9Y5G3 MIR7108-201ENST00000614319 87 ntBASIC22.2■■□□□ 1.14
PCDHGB1Q9Y5G3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms