Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB11Q9Y5F2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.02■■□□□ 1.44
PCDHB11Q9Y5F2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB11Q9Y5F2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PCDHB11Q9Y5F2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB11Q9Y5F2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB11Q9Y5F2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
PCDHB11Q9Y5F2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB11Q9Y5F2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB11Q9Y5F2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
PCDHB11Q9Y5F2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
PCDHB11Q9Y5F2 WHAMMP3-201ENST00000611636 1609 ntBASIC24■■□□□ 1.43
PCDHB11Q9Y5F2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB11Q9Y5F2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24■■□□□ 1.43
PCDHB11Q9Y5F2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDHB11Q9Y5F2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24■■□□□ 1.43
PCDHB11Q9Y5F2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB11Q9Y5F2 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDHB11Q9Y5F2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB11Q9Y5F2 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDHB11Q9Y5F2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
PCDHB11Q9Y5F2 AL359258.2-201ENST00000564063 1566 ntBASIC23.99■■□□□ 1.43
PCDHB11Q9Y5F2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHB11Q9Y5F2 AC004987.1-201ENST00000428627 508 ntBASIC23.98■■□□□ 1.43
PCDHB11Q9Y5F2 ATP5G2P3-201ENST00000429083 425 ntBASIC23.98■■□□□ 1.43
PCDHB11Q9Y5F2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB11Q9Y5F2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDHB11Q9Y5F2 KRT18P60-201ENST00000312876 1297 ntBASIC23.97■■□□□ 1.43
PCDHB11Q9Y5F2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB11Q9Y5F2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
PCDHB11Q9Y5F2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB11Q9Y5F2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.97■■□□□ 1.43
PCDHB11Q9Y5F2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB11Q9Y5F2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB11Q9Y5F2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB11Q9Y5F2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB11Q9Y5F2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB11Q9Y5F2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB11Q9Y5F2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHB11Q9Y5F2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
PCDHB11Q9Y5F2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHB11Q9Y5F2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.94■■□□□ 1.42
PCDHB11Q9Y5F2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
PCDHB11Q9Y5F2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHB11Q9Y5F2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHB11Q9Y5F2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB11Q9Y5F2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB11Q9Y5F2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDHB11Q9Y5F2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
PCDHB11Q9Y5F2 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDHB11Q9Y5F2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB11Q9Y5F2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB11Q9Y5F2 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDHB11Q9Y5F2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.93■■□□□ 1.42
PCDHB11Q9Y5F2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
PCDHB11Q9Y5F2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDHB11Q9Y5F2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.92■■□□□ 1.42
PCDHB11Q9Y5F2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB11Q9Y5F2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB11Q9Y5F2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB11Q9Y5F2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHB11Q9Y5F2 AL449106.1-201ENST00000608517 1980 ntBASIC23.91■■□□□ 1.42
PCDHB11Q9Y5F2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB11Q9Y5F2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB11Q9Y5F2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.91■■□□□ 1.42
PCDHB11Q9Y5F2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB11Q9Y5F2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHB11Q9Y5F2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB11Q9Y5F2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB11Q9Y5F2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB11Q9Y5F2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB11Q9Y5F2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.9■■□□□ 1.42
PCDHB11Q9Y5F2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB11Q9Y5F2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB11Q9Y5F2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
PCDHB11Q9Y5F2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHB11Q9Y5F2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.89■■□□□ 1.42
PCDHB11Q9Y5F2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.89■■□□□ 1.41
PCDHB11Q9Y5F2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHB11Q9Y5F2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.88■■□□□ 1.41
PCDHB11Q9Y5F2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB11Q9Y5F2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB11Q9Y5F2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHB11Q9Y5F2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB11Q9Y5F2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
PCDHB11Q9Y5F2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PCDHB11Q9Y5F2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHB11Q9Y5F2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB11Q9Y5F2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB11Q9Y5F2 AL157400.5-201ENST00000507624 621 ntBASIC23.87■■□□□ 1.41
PCDHB11Q9Y5F2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHB11Q9Y5F2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PCDHB11Q9Y5F2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
PCDHB11Q9Y5F2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB11Q9Y5F2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.86■■□□□ 1.41
PCDHB11Q9Y5F2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB11Q9Y5F2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PCDHB11Q9Y5F2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHB11Q9Y5F2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB11Q9Y5F2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms