Protein–RNA interactions for Protein: Q9Y572

RIPK3, Receptor-interacting serine/threonine-protein kinase 3, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3Q9Y572 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RIPK3Q9Y572 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.34■■■□□ 2.13
RIPK3Q9Y572 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.33■■■□□ 2.13
RIPK3Q9Y572 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RIPK3Q9Y572 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
RIPK3Q9Y572 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
RIPK3Q9Y572 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RIPK3Q9Y572 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.32■■■□□ 2.12
RIPK3Q9Y572 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RIPK3Q9Y572 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
RIPK3Q9Y572 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RIPK3Q9Y572 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
RIPK3Q9Y572 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
RIPK3Q9Y572 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
RIPK3Q9Y572 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
RIPK3Q9Y572 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
RIPK3Q9Y572 AC010980.1-201ENST00000587192 1142 ntBASIC28.3■■■□□ 2.12
RIPK3Q9Y572 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.3■■■□□ 2.12
RIPK3Q9Y572 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
RIPK3Q9Y572 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
RIPK3Q9Y572 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
RIPK3Q9Y572 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.28■■■□□ 2.12
RIPK3Q9Y572 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RIPK3Q9Y572 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.28■■■□□ 2.12
RIPK3Q9Y572 MIR6765-201ENST00000614092 87 ntBASIC28.28■■■□□ 2.12
RIPK3Q9Y572 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
RIPK3Q9Y572 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
RIPK3Q9Y572 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
RIPK3Q9Y572 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RIPK3Q9Y572 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
RIPK3Q9Y572 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RIPK3Q9Y572 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RIPK3Q9Y572 BHLHE23-202ENST00000612929 1109 ntBASIC28.26■■■□□ 2.11
RIPK3Q9Y572 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RIPK3Q9Y572 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.25■■■□□ 2.11
RIPK3Q9Y572 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RIPK3Q9Y572 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.25■■■□□ 2.11
RIPK3Q9Y572 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.25■■■□□ 2.11
RIPK3Q9Y572 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
RIPK3Q9Y572 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RIPK3Q9Y572 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
RIPK3Q9Y572 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.24■■■□□ 2.11
RIPK3Q9Y572 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.24■■■□□ 2.11
RIPK3Q9Y572 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RIPK3Q9Y572 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
RIPK3Q9Y572 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.23■■■□□ 2.11
RIPK3Q9Y572 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RIPK3Q9Y572 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RIPK3Q9Y572 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RIPK3Q9Y572 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RIPK3Q9Y572 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RIPK3Q9Y572 PVT1_1.1-201ENST00000615125 194 ntBASIC28.22■■■□□ 2.11
RIPK3Q9Y572 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RIPK3Q9Y572 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RIPK3Q9Y572 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.21■■■□□ 2.11
RIPK3Q9Y572 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.21■■■□□ 2.11
RIPK3Q9Y572 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RIPK3Q9Y572 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.21■■■□□ 2.11
RIPK3Q9Y572 AC018755.3-202ENST00000596210 929 ntBASIC28.21■■■□□ 2.11
RIPK3Q9Y572 AL451085.2-201ENST00000605085 799 ntBASIC28.21■■■□□ 2.11
RIPK3Q9Y572 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.21■■■□□ 2.11
RIPK3Q9Y572 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RIPK3Q9Y572 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
RIPK3Q9Y572 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RIPK3Q9Y572 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RIPK3Q9Y572 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.2■■■□□ 2.1
RIPK3Q9Y572 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.2■■■□□ 2.1
RIPK3Q9Y572 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC28.19■■■□□ 2.1
RIPK3Q9Y572 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RIPK3Q9Y572 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
RIPK3Q9Y572 KRT8P33-201ENST00000508125 1423 ntBASIC28.18■■■□□ 2.1
RIPK3Q9Y572 AC103834.1-201ENST00000520383 144 ntBASIC28.18■■■□□ 2.1
RIPK3Q9Y572 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.18■■■□□ 2.1
RIPK3Q9Y572 AC074183.2-201ENST00000623112 922 ntBASIC28.18■■■□□ 2.1
RIPK3Q9Y572 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.18■■■□□ 2.1
RIPK3Q9Y572 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.18■■■□□ 2.1
RIPK3Q9Y572 AL449106.1-201ENST00000608517 1980 ntBASIC28.17■■■□□ 2.1
RIPK3Q9Y572 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIPK3Q9Y572 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIPK3Q9Y572 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.17■■■□□ 2.1
RIPK3Q9Y572 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RIPK3Q9Y572 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.17■■■□□ 2.1
RIPK3Q9Y572 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
RIPK3Q9Y572 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC28.16■■■□□ 2.1
RIPK3Q9Y572 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RIPK3Q9Y572 AC139795.1-202ENST00000500444 432 ntBASIC28.16■■■□□ 2.1
RIPK3Q9Y572 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.16■■■□□ 2.1
RIPK3Q9Y572 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
RIPK3Q9Y572 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
RIPK3Q9Y572 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.15■■■□□ 2.1
RIPK3Q9Y572 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RIPK3Q9Y572 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.15■■■□□ 2.1
RIPK3Q9Y572 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.15■■■□□ 2.1
RIPK3Q9Y572 AL035685.1-201ENST00000636663 812 ntBASIC28.15■■■□□ 2.1
RIPK3Q9Y572 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
RIPK3Q9Y572 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
RIPK3Q9Y572 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.14■■■□□ 2.1
RIPK3Q9Y572 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
RIPK3Q9Y572 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
RIPK3Q9Y572 LINC01003-201ENST00000564834 1764 ntBASIC28.14■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms