Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TSC22D4Q9Y3Q8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.66■■□□□ 1.38
TSC22D4Q9Y3Q8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
TSC22D4Q9Y3Q8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TSC22D4Q9Y3Q8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TSC22D4Q9Y3Q8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TSC22D4Q9Y3Q8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TSC22D4Q9Y3Q8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.65■■□□□ 1.38
TSC22D4Q9Y3Q8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TSC22D4Q9Y3Q8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TSC22D4Q9Y3Q8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TSC22D4Q9Y3Q8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TSC22D4Q9Y3Q8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.64■■□□□ 1.37
TSC22D4Q9Y3Q8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TSC22D4Q9Y3Q8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TSC22D4Q9Y3Q8 MIR639-201ENST00000384974 98 ntBASIC23.63■■□□□ 1.37
TSC22D4Q9Y3Q8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.63■■□□□ 1.37
TSC22D4Q9Y3Q8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TSC22D4Q9Y3Q8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TSC22D4Q9Y3Q8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.63■■□□□ 1.37
TSC22D4Q9Y3Q8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.63■■□□□ 1.37
TSC22D4Q9Y3Q8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
TSC22D4Q9Y3Q8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TSC22D4Q9Y3Q8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.62■■□□□ 1.37
TSC22D4Q9Y3Q8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.62■■□□□ 1.37
TSC22D4Q9Y3Q8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.62■■□□□ 1.37
TSC22D4Q9Y3Q8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.62■■□□□ 1.37
TSC22D4Q9Y3Q8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TSC22D4Q9Y3Q8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TSC22D4Q9Y3Q8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TSC22D4Q9Y3Q8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TSC22D4Q9Y3Q8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.61■■□□□ 1.37
TSC22D4Q9Y3Q8 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.61■■□□□ 1.37
TSC22D4Q9Y3Q8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TSC22D4Q9Y3Q8 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.61■■□□□ 1.37
TSC22D4Q9Y3Q8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TSC22D4Q9Y3Q8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TSC22D4Q9Y3Q8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
TSC22D4Q9Y3Q8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
TSC22D4Q9Y3Q8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.6■■□□□ 1.37
TSC22D4Q9Y3Q8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.6■■□□□ 1.37
TSC22D4Q9Y3Q8 AL359258.2-201ENST00000564063 1566 ntBASIC23.6■■□□□ 1.37
TSC22D4Q9Y3Q8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.6■■□□□ 1.37
TSC22D4Q9Y3Q8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TSC22D4Q9Y3Q8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TSC22D4Q9Y3Q8 AC126177.7-201ENST00000547904 679 ntBASIC23.59■■□□□ 1.37
TSC22D4Q9Y3Q8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TSC22D4Q9Y3Q8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.59■■□□□ 1.37
TSC22D4Q9Y3Q8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TSC22D4Q9Y3Q8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.58■■□□□ 1.37
TSC22D4Q9Y3Q8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TSC22D4Q9Y3Q8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TSC22D4Q9Y3Q8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
TSC22D4Q9Y3Q8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.58■■□□□ 1.36
TSC22D4Q9Y3Q8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.57■■□□□ 1.36
TSC22D4Q9Y3Q8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TSC22D4Q9Y3Q8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.57■■□□□ 1.36
TSC22D4Q9Y3Q8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.57■■□□□ 1.36
TSC22D4Q9Y3Q8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TSC22D4Q9Y3Q8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
TSC22D4Q9Y3Q8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TSC22D4Q9Y3Q8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TSC22D4Q9Y3Q8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
TSC22D4Q9Y3Q8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TSC22D4Q9Y3Q8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TSC22D4Q9Y3Q8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TSC22D4Q9Y3Q8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TSC22D4Q9Y3Q8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
TSC22D4Q9Y3Q8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TSC22D4Q9Y3Q8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TSC22D4Q9Y3Q8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TSC22D4Q9Y3Q8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.55■■□□□ 1.36
TSC22D4Q9Y3Q8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TSC22D4Q9Y3Q8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TSC22D4Q9Y3Q8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TSC22D4Q9Y3Q8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.54■■□□□ 1.36
TSC22D4Q9Y3Q8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TSC22D4Q9Y3Q8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.54■■□□□ 1.36
TSC22D4Q9Y3Q8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
TSC22D4Q9Y3Q8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.53■■□□□ 1.36
TSC22D4Q9Y3Q8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.53■■□□□ 1.36
TSC22D4Q9Y3Q8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TSC22D4Q9Y3Q8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.52■■□□□ 1.36
TSC22D4Q9Y3Q8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TSC22D4Q9Y3Q8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TSC22D4Q9Y3Q8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TSC22D4Q9Y3Q8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.52■■□□□ 1.36
TSC22D4Q9Y3Q8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TSC22D4Q9Y3Q8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TSC22D4Q9Y3Q8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TSC22D4Q9Y3Q8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TSC22D4Q9Y3Q8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TSC22D4Q9Y3Q8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TSC22D4Q9Y3Q8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
TSC22D4Q9Y3Q8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TSC22D4Q9Y3Q8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TSC22D4Q9Y3Q8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TSC22D4Q9Y3Q8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TSC22D4Q9Y3Q8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TSC22D4Q9Y3Q8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms