Protein–RNA interactions for Protein: Q9UJ94

LINC00527, Putative uncharacterized protein encoded by LINC00527, humanhuman

Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00527Q9UJ94 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.4■□□□□ 0.7
LINC00527Q9UJ94 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00527Q9UJ94 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.39■□□□□ 0.7
LINC00527Q9UJ94 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LINC00527Q9UJ94 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00527Q9UJ94 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00527Q9UJ94 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.39■□□□□ 0.69
LINC00527Q9UJ94 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.39■□□□□ 0.69
LINC00527Q9UJ94 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00527Q9UJ94 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00527Q9UJ94 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00527Q9UJ94 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00527Q9UJ94 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.39■□□□□ 0.69
LINC00527Q9UJ94 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00527Q9UJ94 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00527Q9UJ94 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00527Q9UJ94 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.38■□□□□ 0.69
LINC00527Q9UJ94 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00527Q9UJ94 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.37■□□□□ 0.69
LINC00527Q9UJ94 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00527Q9UJ94 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00527Q9UJ94 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00527Q9UJ94 AC007029.1-201ENST00000604183 313 ntBASIC19.37■□□□□ 0.69
LINC00527Q9UJ94 U85056.1-201ENST00000616429 682 ntBASIC19.37■□□□□ 0.69
LINC00527Q9UJ94 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00527Q9UJ94 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00527Q9UJ94 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00527Q9UJ94 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00527Q9UJ94 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00527Q9UJ94 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00527Q9UJ94 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00527Q9UJ94 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.36■□□□□ 0.69
LINC00527Q9UJ94 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.36■□□□□ 0.69
LINC00527Q9UJ94 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.36■□□□□ 0.69
LINC00527Q9UJ94 AC025884.2-201ENST00000553429 711 ntBASIC19.36■□□□□ 0.69
LINC00527Q9UJ94 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.36■□□□□ 0.69
LINC00527Q9UJ94 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00527Q9UJ94 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00527Q9UJ94 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.36■□□□□ 0.69
LINC00527Q9UJ94 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.35■□□□□ 0.69
LINC00527Q9UJ94 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LINC00527Q9UJ94 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.35■□□□□ 0.69
LINC00527Q9UJ94 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00527Q9UJ94 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00527Q9UJ94 AP004609.3-201ENST00000610705 1884 ntBASIC19.35■□□□□ 0.69
LINC00527Q9UJ94 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00527Q9UJ94 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.34■□□□□ 0.69
LINC00527Q9UJ94 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00527Q9UJ94 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00527Q9UJ94 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00527Q9UJ94 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00527Q9UJ94 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00527Q9UJ94 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00527Q9UJ94 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00527Q9UJ94 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.33■□□□□ 0.69
LINC00527Q9UJ94 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00527Q9UJ94 NTF6A-201ENST00000591175 560 ntBASIC19.33■□□□□ 0.68
LINC00527Q9UJ94 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LINC00527Q9UJ94 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
LINC00527Q9UJ94 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00527Q9UJ94 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00527Q9UJ94 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00527Q9UJ94 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LINC00527Q9UJ94 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.32■□□□□ 0.68
LINC00527Q9UJ94 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00527Q9UJ94 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LINC00527Q9UJ94 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00527Q9UJ94 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00527Q9UJ94 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
LINC00527Q9UJ94 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00527Q9UJ94 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.31■□□□□ 0.68
LINC00527Q9UJ94 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00527Q9UJ94 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00527Q9UJ94 RP9P-202ENST00000450133 1212 ntBASIC19.31■□□□□ 0.68
LINC00527Q9UJ94 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00527Q9UJ94 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00527Q9UJ94 AC093536.1-201ENST00000569153 554 ntBASIC19.31■□□□□ 0.68
LINC00527Q9UJ94 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LINC00527Q9UJ94 AC133552.2-201ENST00000619106 1032 ntBASIC19.31■□□□□ 0.68
LINC00527Q9UJ94 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.31■□□□□ 0.68
LINC00527Q9UJ94 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
LINC00527Q9UJ94 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00527Q9UJ94 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00527Q9UJ94 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00527Q9UJ94 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00527Q9UJ94 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LINC00527Q9UJ94 MIR3960-201ENST00000583311 91 ntBASIC19.3■□□□□ 0.68
LINC00527Q9UJ94 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LINC00527Q9UJ94 AC009831.1-201ENST00000580420 1582 ntBASIC19.3■□□□□ 0.68
LINC00527Q9UJ94 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC00527Q9UJ94 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00527Q9UJ94 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00527Q9UJ94 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00527Q9UJ94 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.29■□□□□ 0.68
LINC00527Q9UJ94 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LINC00527Q9UJ94 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.29■□□□□ 0.68
LINC00527Q9UJ94 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00527Q9UJ94 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LINC00527Q9UJ94 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.29■□□□□ 0.68
LINC00527Q9UJ94 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 216.4 ms