Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF7Q9UBF6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF7Q9UBF6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF7Q9UBF6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF7Q9UBF6 AL121749.1-202ENST00000609313 2153 ntBASIC20.72■□□□□ 0.91
RNF7Q9UBF6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF7Q9UBF6 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF7Q9UBF6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF7Q9UBF6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF7Q9UBF6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF7Q9UBF6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF7Q9UBF6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF7Q9UBF6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF7Q9UBF6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF7Q9UBF6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF7Q9UBF6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF7Q9UBF6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF7Q9UBF6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RNF7Q9UBF6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF7Q9UBF6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF7Q9UBF6 SMPD5-203ENST00000639008 1464 ntBASIC20.69■□□□□ 0.9
RNF7Q9UBF6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF7Q9UBF6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF7Q9UBF6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF7Q9UBF6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF7Q9UBF6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF7Q9UBF6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF7Q9UBF6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
RNF7Q9UBF6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF7Q9UBF6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF7Q9UBF6 AC025884.2-201ENST00000553429 711 ntBASIC20.66■□□□□ 0.9
RNF7Q9UBF6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF7Q9UBF6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF7Q9UBF6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF7Q9UBF6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF7Q9UBF6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF7Q9UBF6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RNF7Q9UBF6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF7Q9UBF6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF7Q9UBF6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF7Q9UBF6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.65■□□□□ 0.9
RNF7Q9UBF6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF7Q9UBF6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RNF7Q9UBF6 RARRES2P2-201ENST00000394842 485 ntBASIC20.64■□□□□ 0.89
RNF7Q9UBF6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF7Q9UBF6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF7Q9UBF6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF7Q9UBF6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF7Q9UBF6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF7Q9UBF6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
RNF7Q9UBF6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF7Q9UBF6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF7Q9UBF6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF7Q9UBF6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF7Q9UBF6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RNF7Q9UBF6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF7Q9UBF6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF7Q9UBF6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
RNF7Q9UBF6 MIR3960-201ENST00000583311 91 ntBASIC20.62■□□□□ 0.89
RNF7Q9UBF6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.62■□□□□ 0.89
RNF7Q9UBF6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF7Q9UBF6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF7Q9UBF6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF7Q9UBF6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF7Q9UBF6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RNF7Q9UBF6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.61■□□□□ 0.89
RNF7Q9UBF6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RNF7Q9UBF6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF7Q9UBF6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF7Q9UBF6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF7Q9UBF6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF7Q9UBF6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF7Q9UBF6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF7Q9UBF6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF7Q9UBF6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF7Q9UBF6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF7Q9UBF6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF7Q9UBF6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF7Q9UBF6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF7Q9UBF6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
RNF7Q9UBF6 AC007029.1-201ENST00000604183 313 ntBASIC20.59■□□□□ 0.89
RNF7Q9UBF6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RNF7Q9UBF6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
RNF7Q9UBF6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF7Q9UBF6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF7Q9UBF6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF7Q9UBF6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF7Q9UBF6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF7Q9UBF6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF7Q9UBF6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RNF7Q9UBF6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF7Q9UBF6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
RNF7Q9UBF6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF7Q9UBF6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.57■□□□□ 0.88
RNF7Q9UBF6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF7Q9UBF6 RP9P-202ENST00000450133 1212 ntBASIC20.57■□□□□ 0.88
RNF7Q9UBF6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF7Q9UBF6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF7Q9UBF6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF7Q9UBF6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms