Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CPSF2Q9P2I0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CPSF2Q9P2I0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.43■■□□□ 1.5
CPSF2Q9P2I0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CPSF2Q9P2I0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CPSF2Q9P2I0 AC092803.2-201ENST00000564287 1899 ntBASIC24.43■■□□□ 1.5
CPSF2Q9P2I0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CPSF2Q9P2I0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.42■■□□□ 1.5
CPSF2Q9P2I0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CPSF2Q9P2I0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CPSF2Q9P2I0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CPSF2Q9P2I0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CPSF2Q9P2I0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CPSF2Q9P2I0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.4■■□□□ 1.5
CPSF2Q9P2I0 AC020928.2-201ENST00000588717 2197 ntBASIC24.39■■□□□ 1.5
CPSF2Q9P2I0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CPSF2Q9P2I0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.39■■□□□ 1.49
CPSF2Q9P2I0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CPSF2Q9P2I0 WHAMMP3-201ENST00000611636 1609 ntBASIC24.39■■□□□ 1.49
CPSF2Q9P2I0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CPSF2Q9P2I0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CPSF2Q9P2I0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CPSF2Q9P2I0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CPSF2Q9P2I0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CPSF2Q9P2I0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.38■■□□□ 1.49
CPSF2Q9P2I0 RPS2P35-201ENST00000443417 897 ntBASIC24.38■■□□□ 1.49
CPSF2Q9P2I0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.38■■□□□ 1.49
CPSF2Q9P2I0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
CPSF2Q9P2I0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.38■■□□□ 1.49
CPSF2Q9P2I0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CPSF2Q9P2I0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.37■■□□□ 1.49
CPSF2Q9P2I0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.37■■□□□ 1.49
CPSF2Q9P2I0 AC142472.1-201ENST00000612013 1741 ntBASIC24.37■■□□□ 1.49
CPSF2Q9P2I0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CPSF2Q9P2I0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
CPSF2Q9P2I0 DUSP8P4-201ENST00000399538 1761 ntBASIC24.36■■□□□ 1.49
CPSF2Q9P2I0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CPSF2Q9P2I0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPSF2Q9P2I0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
CPSF2Q9P2I0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPSF2Q9P2I0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CPSF2Q9P2I0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPSF2Q9P2I0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.34■■□□□ 1.49
CPSF2Q9P2I0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPSF2Q9P2I0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CPSF2Q9P2I0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CPSF2Q9P2I0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPSF2Q9P2I0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPSF2Q9P2I0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CPSF2Q9P2I0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CPSF2Q9P2I0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPSF2Q9P2I0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CPSF2Q9P2I0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CPSF2Q9P2I0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.33■■□□□ 1.49
CPSF2Q9P2I0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.33■■□□□ 1.49
CPSF2Q9P2I0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CPSF2Q9P2I0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.32■■□□□ 1.48
CPSF2Q9P2I0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CPSF2Q9P2I0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CPSF2Q9P2I0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CPSF2Q9P2I0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CPSF2Q9P2I0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CPSF2Q9P2I0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.32■■□□□ 1.48
CPSF2Q9P2I0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CPSF2Q9P2I0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.32■■□□□ 1.48
CPSF2Q9P2I0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.32■■□□□ 1.48
CPSF2Q9P2I0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CPSF2Q9P2I0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CPSF2Q9P2I0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.31■■□□□ 1.48
CPSF2Q9P2I0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CPSF2Q9P2I0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
CPSF2Q9P2I0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPSF2Q9P2I0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
CPSF2Q9P2I0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPSF2Q9P2I0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPSF2Q9P2I0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CPSF2Q9P2I0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.3■■□□□ 1.48
CPSF2Q9P2I0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.3■■□□□ 1.48
CPSF2Q9P2I0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPSF2Q9P2I0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPSF2Q9P2I0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.3■■□□□ 1.48
CPSF2Q9P2I0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CPSF2Q9P2I0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.29■■□□□ 1.48
CPSF2Q9P2I0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.29■■□□□ 1.48
CPSF2Q9P2I0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
CPSF2Q9P2I0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
CPSF2Q9P2I0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CPSF2Q9P2I0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CPSF2Q9P2I0 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.28■■□□□ 1.48
CPSF2Q9P2I0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CPSF2Q9P2I0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.28■■□□□ 1.48
CPSF2Q9P2I0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CPSF2Q9P2I0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
CPSF2Q9P2I0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CPSF2Q9P2I0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CPSF2Q9P2I0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.26■■□□□ 1.47
CPSF2Q9P2I0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CPSF2Q9P2I0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.26■■□□□ 1.47
CPSF2Q9P2I0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CPSF2Q9P2I0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms