Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB16Q9NRJ7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB16Q9NRJ7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHB16Q9NRJ7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB16Q9NRJ7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PCDHB16Q9NRJ7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB16Q9NRJ7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDHB16Q9NRJ7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PCDHB16Q9NRJ7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB16Q9NRJ7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PCDHB16Q9NRJ7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PCDHB16Q9NRJ7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PCDHB16Q9NRJ7 AC142472.1-201ENST00000612013 1741 ntBASIC21.04■□□□□ 0.96
PCDHB16Q9NRJ7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB16Q9NRJ7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB16Q9NRJ7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB16Q9NRJ7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB16Q9NRJ7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB16Q9NRJ7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB16Q9NRJ7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB16Q9NRJ7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB16Q9NRJ7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB16Q9NRJ7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB16Q9NRJ7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB16Q9NRJ7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB16Q9NRJ7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB16Q9NRJ7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
PCDHB16Q9NRJ7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHB16Q9NRJ7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB16Q9NRJ7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHB16Q9NRJ7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB16Q9NRJ7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB16Q9NRJ7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PCDHB16Q9NRJ7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB16Q9NRJ7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB16Q9NRJ7 AC092803.2-201ENST00000564287 1899 ntBASIC20.99■□□□□ 0.95
PCDHB16Q9NRJ7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB16Q9NRJ7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB16Q9NRJ7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB16Q9NRJ7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB16Q9NRJ7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB16Q9NRJ7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PCDHB16Q9NRJ7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB16Q9NRJ7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
PCDHB16Q9NRJ7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB16Q9NRJ7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDHB16Q9NRJ7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDHB16Q9NRJ7 DUSP8P4-201ENST00000399538 1761 ntBASIC20.97■□□□□ 0.95
PCDHB16Q9NRJ7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB16Q9NRJ7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB16Q9NRJ7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB16Q9NRJ7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHB16Q9NRJ7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PCDHB16Q9NRJ7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PCDHB16Q9NRJ7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB16Q9NRJ7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PCDHB16Q9NRJ7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB16Q9NRJ7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB16Q9NRJ7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PCDHB16Q9NRJ7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHB16Q9NRJ7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB16Q9NRJ7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PCDHB16Q9NRJ7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHB16Q9NRJ7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PCDHB16Q9NRJ7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHB16Q9NRJ7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
PCDHB16Q9NRJ7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHB16Q9NRJ7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PCDHB16Q9NRJ7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHB16Q9NRJ7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB16Q9NRJ7 AC093323.1-202ENST00000635031 2045 ntBASIC20.92■□□□□ 0.94
PCDHB16Q9NRJ7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB16Q9NRJ7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDHB16Q9NRJ7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDHB16Q9NRJ7 AC008813.1-201ENST00000536597 885 ntBASIC20.92■□□□□ 0.94
PCDHB16Q9NRJ7 LINC01971-201ENST00000617888 1048 ntBASIC20.92■□□□□ 0.94
PCDHB16Q9NRJ7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB16Q9NRJ7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
PCDHB16Q9NRJ7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PCDHB16Q9NRJ7 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHB16Q9NRJ7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
PCDHB16Q9NRJ7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PCDHB16Q9NRJ7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB16Q9NRJ7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB16Q9NRJ7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PCDHB16Q9NRJ7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHB16Q9NRJ7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHB16Q9NRJ7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHB16Q9NRJ7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PCDHB16Q9NRJ7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHB16Q9NRJ7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHB16Q9NRJ7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHB16Q9NRJ7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB16Q9NRJ7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB16Q9NRJ7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB16Q9NRJ7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB16Q9NRJ7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB16Q9NRJ7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB16Q9NRJ7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB16Q9NRJ7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms