Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
ZNF304Q9HCX3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.27■■□□□ 1.32
ZNF304Q9HCX3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF304Q9HCX3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.27■■□□□ 1.32
ZNF304Q9HCX3 AL449106.1-201ENST00000608517 1980 ntBASIC23.27■■□□□ 1.32
ZNF304Q9HCX3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF304Q9HCX3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF304Q9HCX3 AC133552.2-201ENST00000619106 1032 ntBASIC23.27■■□□□ 1.32
ZNF304Q9HCX3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF304Q9HCX3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF304Q9HCX3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
ZNF304Q9HCX3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
ZNF304Q9HCX3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.26■■□□□ 1.31
ZNF304Q9HCX3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF304Q9HCX3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
ZNF304Q9HCX3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF304Q9HCX3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.26■■□□□ 1.31
ZNF304Q9HCX3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.26■■□□□ 1.31
ZNF304Q9HCX3 AC012354.3-201ENST00000623734 483 ntBASIC23.26■■□□□ 1.31
ZNF304Q9HCX3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
ZNF304Q9HCX3 AC093536.1-201ENST00000569153 554 ntBASIC23.25■■□□□ 1.31
ZNF304Q9HCX3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF304Q9HCX3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF304Q9HCX3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF304Q9HCX3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF304Q9HCX3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.24■■□□□ 1.31
ZNF304Q9HCX3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF304Q9HCX3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF304Q9HCX3 AC009831.1-201ENST00000580420 1582 ntBASIC23.24■■□□□ 1.31
ZNF304Q9HCX3 KRT18P60-201ENST00000312876 1297 ntBASIC23.24■■□□□ 1.31
ZNF304Q9HCX3 AC026202.3-201ENST00000600805 1127 ntBASIC23.24■■□□□ 1.31
ZNF304Q9HCX3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.23■■□□□ 1.31
ZNF304Q9HCX3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF304Q9HCX3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.23■■□□□ 1.31
ZNF304Q9HCX3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
ZNF304Q9HCX3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZNF304Q9HCX3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZNF304Q9HCX3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
ZNF304Q9HCX3 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.22■■□□□ 1.31
ZNF304Q9HCX3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZNF304Q9HCX3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZNF304Q9HCX3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZNF304Q9HCX3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZNF304Q9HCX3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
ZNF304Q9HCX3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZNF304Q9HCX3 AL592293.1-201ENST00000502889 1188 ntBASIC23.2■■□□□ 1.3
ZNF304Q9HCX3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.2■■□□□ 1.3
ZNF304Q9HCX3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZNF304Q9HCX3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZNF304Q9HCX3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.19■■□□□ 1.3
ZNF304Q9HCX3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZNF304Q9HCX3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ZNF304Q9HCX3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZNF304Q9HCX3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.19■■□□□ 1.3
ZNF304Q9HCX3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZNF304Q9HCX3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
ZNF304Q9HCX3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
ZNF304Q9HCX3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
ZNF304Q9HCX3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
ZNF304Q9HCX3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
ZNF304Q9HCX3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZNF304Q9HCX3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ZNF304Q9HCX3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ZNF304Q9HCX3 RAP2CP1-202ENST00000605179 643 ntBASIC23.17■■□□□ 1.3
ZNF304Q9HCX3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ZNF304Q9HCX3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
ZNF304Q9HCX3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.16■■□□□ 1.3
ZNF304Q9HCX3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.16■■□□□ 1.3
ZNF304Q9HCX3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
ZNF304Q9HCX3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.16■■□□□ 1.3
ZNF304Q9HCX3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF304Q9HCX3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ZNF304Q9HCX3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZNF304Q9HCX3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.15■■□□□ 1.3
ZNF304Q9HCX3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZNF304Q9HCX3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
ZNF304Q9HCX3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ZNF304Q9HCX3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF304Q9HCX3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.14■■□□□ 1.29
ZNF304Q9HCX3 AL033527.3-201ENST00000566366 1196 ntBASIC23.14■■□□□ 1.29
ZNF304Q9HCX3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
ZNF304Q9HCX3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF304Q9HCX3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF304Q9HCX3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.13■■□□□ 1.29
ZNF304Q9HCX3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF304Q9HCX3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF304Q9HCX3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF304Q9HCX3 AC004987.1-201ENST00000428627 508 ntBASIC23.13■■□□□ 1.29
ZNF304Q9HCX3 AC129492.7-201ENST00000622992 756 ntBASIC23.13■■□□□ 1.29
ZNF304Q9HCX3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
ZNF304Q9HCX3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
ZNF304Q9HCX3 TSPY13P-201ENST00000338964 914 ntBASIC23.12■■□□□ 1.29
ZNF304Q9HCX3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF304Q9HCX3 ATP5G2P3-201ENST00000429083 425 ntBASIC23.12■■□□□ 1.29
ZNF304Q9HCX3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
ZNF304Q9HCX3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.12■■□□□ 1.29
ZNF304Q9HCX3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF304Q9HCX3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF304Q9HCX3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.11■■□□□ 1.29
ZNF304Q9HCX3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms