Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MUC4Q99102 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MUC4Q99102 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MUC4Q99102 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MUC4Q99102 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MUC4Q99102 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MUC4Q99102 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MUC4Q99102 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.85■□□□□ 0.45
MUC4Q99102 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MUC4Q99102 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MUC4Q99102 CR559946.2-201ENST00000623684 991 ntBASIC17.84■□□□□ 0.45
MUC4Q99102 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MUC4Q99102 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MUC4Q99102 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MUC4Q99102 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MUC4Q99102 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MUC4Q99102 DUX4L11-201ENST00000611504 1267 ntBASIC17.83■□□□□ 0.45
MUC4Q99102 DUX4L12-201ENST00000614593 1267 ntBASIC17.83■□□□□ 0.45
MUC4Q99102 DUX4L14-201ENST00000621227 1267 ntBASIC17.83■□□□□ 0.45
MUC4Q99102 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
MUC4Q99102 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MUC4Q99102 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MUC4Q99102 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.83■□□□□ 0.44
MUC4Q99102 AC148477.6-201ENST00000623746 465 ntBASIC17.83■□□□□ 0.44
MUC4Q99102 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
MUC4Q99102 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MUC4Q99102 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MUC4Q99102 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
MUC4Q99102 ERN1-208ENST00000606895 2068 ntBASIC17.82■□□□□ 0.44
MUC4Q99102 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MUC4Q99102 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MUC4Q99102 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.82■□□□□ 0.44
MUC4Q99102 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
MUC4Q99102 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MUC4Q99102 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MUC4Q99102 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.81■□□□□ 0.44
MUC4Q99102 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.81■□□□□ 0.44
MUC4Q99102 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.81■□□□□ 0.44
MUC4Q99102 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MUC4Q99102 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
MUC4Q99102 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MUC4Q99102 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MUC4Q99102 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MUC4Q99102 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MUC4Q99102 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MUC4Q99102 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MUC4Q99102 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.8■□□□□ 0.44
MUC4Q99102 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MUC4Q99102 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.8■□□□□ 0.44
MUC4Q99102 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MUC4Q99102 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.8■□□□□ 0.44
MUC4Q99102 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MUC4Q99102 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
MUC4Q99102 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
MUC4Q99102 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MUC4Q99102 MIR3648-2-201ENST00000581792 180 ntBASIC17.79■□□□□ 0.44
MUC4Q99102 MIR3648-1-201ENST00000615959 180 ntBASIC17.79■□□□□ 0.44
MUC4Q99102 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MUC4Q99102 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MUC4Q99102 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MUC4Q99102 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MUC4Q99102 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
MUC4Q99102 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MUC4Q99102 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.78■□□□□ 0.44
MUC4Q99102 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MUC4Q99102 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MUC4Q99102 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MUC4Q99102 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MUC4Q99102 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
MUC4Q99102 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MUC4Q99102 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MUC4Q99102 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MUC4Q99102 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.77■□□□□ 0.44
MUC4Q99102 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
MUC4Q99102 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
MUC4Q99102 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.77■□□□□ 0.44
MUC4Q99102 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MUC4Q99102 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MUC4Q99102 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MUC4Q99102 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MUC4Q99102 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MUC4Q99102 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
MUC4Q99102 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
MUC4Q99102 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MUC4Q99102 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MUC4Q99102 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MUC4Q99102 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.76■□□□□ 0.43
MUC4Q99102 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MUC4Q99102 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MUC4Q99102 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.76■□□□□ 0.43
MUC4Q99102 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MUC4Q99102 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.76■□□□□ 0.43
MUC4Q99102 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
MUC4Q99102 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.75■□□□□ 0.43
MUC4Q99102 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MUC4Q99102 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MUC4Q99102 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
MUC4Q99102 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MUC4Q99102 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.74■□□□□ 0.43
MUC4Q99102 AC016575.1-201ENST00000607026 382 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms