Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 AL359258.2-201ENST00000564063 1566 ntBASIC26.13■■□□□ 1.77
PCDHB18PQ96TA0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB18PQ96TA0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
PCDHB18PQ96TA0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB18PQ96TA0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB18PQ96TA0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB18PQ96TA0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB18PQ96TA0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB18PQ96TA0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB18PQ96TA0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.12■■□□□ 1.77
PCDHB18PQ96TA0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB18PQ96TA0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB18PQ96TA0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB18PQ96TA0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB18PQ96TA0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB18PQ96TA0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB18PQ96TA0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB18PQ96TA0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB18PQ96TA0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.11■■□□□ 1.77
PCDHB18PQ96TA0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB18PQ96TA0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
PCDHB18PQ96TA0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.1■■□□□ 1.77
PCDHB18PQ96TA0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB18PQ96TA0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB18PQ96TA0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
PCDHB18PQ96TA0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB18PQ96TA0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB18PQ96TA0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
PCDHB18PQ96TA0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB18PQ96TA0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.08■■□□□ 1.77
PCDHB18PQ96TA0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHB18PQ96TA0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
PCDHB18PQ96TA0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.08■■□□□ 1.77
PCDHB18PQ96TA0 DUSP8P4-201ENST00000399538 1761 ntBASIC26.07■■□□□ 1.76
PCDHB18PQ96TA0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHB18PQ96TA0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.07■■□□□ 1.76
PCDHB18PQ96TA0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHB18PQ96TA0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.07■■□□□ 1.76
PCDHB18PQ96TA0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB18PQ96TA0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB18PQ96TA0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDHB18PQ96TA0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB18PQ96TA0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDHB18PQ96TA0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB18PQ96TA0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB18PQ96TA0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
PCDHB18PQ96TA0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHB18PQ96TA0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHB18PQ96TA0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHB18PQ96TA0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.04■■□□□ 1.76
PCDHB18PQ96TA0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHB18PQ96TA0 AL359504.2-201ENST00000605506 1601 ntBASIC26.03■■□□□ 1.76
PCDHB18PQ96TA0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHB18PQ96TA0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
PCDHB18PQ96TA0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.03■■□□□ 1.76
PCDHB18PQ96TA0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHB18PQ96TA0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHB18PQ96TA0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHB18PQ96TA0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
PCDHB18PQ96TA0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHB18PQ96TA0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHB18PQ96TA0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHB18PQ96TA0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHB18PQ96TA0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.01■■□□□ 1.75
PCDHB18PQ96TA0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHB18PQ96TA0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHB18PQ96TA0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26■■□□□ 1.75
PCDHB18PQ96TA0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26■■□□□ 1.75
PCDHB18PQ96TA0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDHB18PQ96TA0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDHB18PQ96TA0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHB18PQ96TA0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHB18PQ96TA0 ERN1-208ENST00000606895 2068 ntBASIC25.99■■□□□ 1.75
PCDHB18PQ96TA0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHB18PQ96TA0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHB18PQ96TA0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.99■■□□□ 1.75
PCDHB18PQ96TA0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHB18PQ96TA0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHB18PQ96TA0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHB18PQ96TA0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.98■■□□□ 1.75
PCDHB18PQ96TA0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHB18PQ96TA0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHB18PQ96TA0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHB18PQ96TA0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHB18PQ96TA0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHB18PQ96TA0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHB18PQ96TA0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHB18PQ96TA0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHB18PQ96TA0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB18PQ96TA0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB18PQ96TA0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB18PQ96TA0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB18PQ96TA0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
PCDHB18PQ96TA0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHB18PQ96TA0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.75
PCDHB18PQ96TA0 MIR639-201ENST00000384974 98 ntBASIC25.95■■□□□ 1.74
PCDHB18PQ96TA0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHB18PQ96TA0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHB18PQ96TA0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHB18PQ96TA0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms