Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CRAMP1Q96RY5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CRAMP1Q96RY5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
CRAMP1Q96RY5 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CRAMP1Q96RY5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
CRAMP1Q96RY5 AL592295.1-201ENST00000400984 884 ntBASIC30.61■■■□□ 2.49
CRAMP1Q96RY5 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CRAMP1Q96RY5 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CRAMP1Q96RY5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CRAMP1Q96RY5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CRAMP1Q96RY5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CRAMP1Q96RY5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.59■■■□□ 2.49
CRAMP1Q96RY5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC30.59■■■□□ 2.49
CRAMP1Q96RY5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.59■■■□□ 2.49
CRAMP1Q96RY5 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.58■■■□□ 2.49
CRAMP1Q96RY5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.58■■■□□ 2.49
CRAMP1Q96RY5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.49
CRAMP1Q96RY5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CRAMP1Q96RY5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CRAMP1Q96RY5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CRAMP1Q96RY5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
CRAMP1Q96RY5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CRAMP1Q96RY5 GUSBP5-201ENST00000418136 578 ntBASIC30.56■■■□□ 2.48
CRAMP1Q96RY5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.56■■■□□ 2.48
CRAMP1Q96RY5 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CRAMP1Q96RY5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
CRAMP1Q96RY5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
CRAMP1Q96RY5 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.55■■■□□ 2.48
CRAMP1Q96RY5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CRAMP1Q96RY5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC30.55■■■□□ 2.48
CRAMP1Q96RY5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
CRAMP1Q96RY5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CRAMP1Q96RY5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.54■■■□□ 2.48
CRAMP1Q96RY5 AC103724.3-201ENST00000564481 992 ntBASIC30.54■■■□□ 2.48
CRAMP1Q96RY5 WHAMMP3-201ENST00000611636 1609 ntBASIC30.54■■■□□ 2.48
CRAMP1Q96RY5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
CRAMP1Q96RY5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.53■■■□□ 2.48
CRAMP1Q96RY5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CRAMP1Q96RY5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CRAMP1Q96RY5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CRAMP1Q96RY5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CRAMP1Q96RY5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
CRAMP1Q96RY5 AC019171.1-201ENST00000601251 1056 ntBASIC30.51■■■□□ 2.47
CRAMP1Q96RY5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CRAMP1Q96RY5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.5■■■□□ 2.47
CRAMP1Q96RY5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC30.5■■■□□ 2.47
CRAMP1Q96RY5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.5■■■□□ 2.47
CRAMP1Q96RY5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
CRAMP1Q96RY5 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CRAMP1Q96RY5 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CRAMP1Q96RY5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.49■■■□□ 2.47
CRAMP1Q96RY5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CRAMP1Q96RY5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.48■■■□□ 2.47
CRAMP1Q96RY5 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CRAMP1Q96RY5 AL031848.2-201ENST00000607670 837 ntBASIC30.48■■■□□ 2.47
CRAMP1Q96RY5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.47■■■□□ 2.47
CRAMP1Q96RY5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
CRAMP1Q96RY5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CRAMP1Q96RY5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CRAMP1Q96RY5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
CRAMP1Q96RY5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.47■■■□□ 2.47
CRAMP1Q96RY5 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CRAMP1Q96RY5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CRAMP1Q96RY5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CRAMP1Q96RY5 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
CRAMP1Q96RY5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CRAMP1Q96RY5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CRAMP1Q96RY5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
CRAMP1Q96RY5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.45■■■□□ 2.47
CRAMP1Q96RY5 AC087393.1-201ENST00000582896 145 ntBASIC30.45■■■□□ 2.47
CRAMP1Q96RY5 AC131212.1-201ENST00000613771 668 ntBASIC30.45■■■□□ 2.47
CRAMP1Q96RY5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
CRAMP1Q96RY5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CRAMP1Q96RY5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CRAMP1Q96RY5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.44■■■□□ 2.46
CRAMP1Q96RY5 THA1P-201ENST00000590384 1145 ntBASIC30.44■■■□□ 2.46
CRAMP1Q96RY5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CRAMP1Q96RY5 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.44■■■□□ 2.46
CRAMP1Q96RY5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CRAMP1Q96RY5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CRAMP1Q96RY5 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
CRAMP1Q96RY5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.42■■■□□ 2.46
CRAMP1Q96RY5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
CRAMP1Q96RY5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CRAMP1Q96RY5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CRAMP1Q96RY5 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CRAMP1Q96RY5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
CRAMP1Q96RY5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.41■■■□□ 2.46
CRAMP1Q96RY5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CRAMP1Q96RY5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CRAMP1Q96RY5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
CRAMP1Q96RY5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CRAMP1Q96RY5 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
CRAMP1Q96RY5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CRAMP1Q96RY5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.39■■■□□ 2.46
CRAMP1Q96RY5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CRAMP1Q96RY5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
CRAMP1Q96RY5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.38■■■□□ 2.45
CRAMP1Q96RY5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CRAMP1Q96RY5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.38■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms