Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD1Q8N668 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD1Q8N668 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.15■□□□□ 0.82
COMMD1Q8N668 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD1Q8N668 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD1Q8N668 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD1Q8N668 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.14■□□□□ 0.81
COMMD1Q8N668 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD1Q8N668 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD1Q8N668 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD1Q8N668 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD1Q8N668 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD1Q8N668 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD1Q8N668 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.13■□□□□ 0.81
COMMD1Q8N668 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.13■□□□□ 0.81
COMMD1Q8N668 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD1Q8N668 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
COMMD1Q8N668 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD1Q8N668 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD1Q8N668 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.12■□□□□ 0.81
COMMD1Q8N668 MIR4449-201ENST00000578365 66 ntBASIC20.12■□□□□ 0.81
COMMD1Q8N668 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD1Q8N668 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD1Q8N668 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COMMD1Q8N668 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COMMD1Q8N668 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
COMMD1Q8N668 AC135983.2-203ENST00000454486 1613 ntBASIC20.11■□□□□ 0.81
COMMD1Q8N668 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.11■□□□□ 0.81
COMMD1Q8N668 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COMMD1Q8N668 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COMMD1Q8N668 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COMMD1Q8N668 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD1Q8N668 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD1Q8N668 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD1Q8N668 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
COMMD1Q8N668 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.09■□□□□ 0.81
COMMD1Q8N668 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COMMD1Q8N668 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COMMD1Q8N668 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COMMD1Q8N668 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD1Q8N668 DUSP8P4-201ENST00000399538 1761 ntBASIC20.08■□□□□ 0.81
COMMD1Q8N668 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
COMMD1Q8N668 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD1Q8N668 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.08■□□□□ 0.81
COMMD1Q8N668 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
COMMD1Q8N668 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.07■□□□□ 0.8
COMMD1Q8N668 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.07■□□□□ 0.8
COMMD1Q8N668 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COMMD1Q8N668 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COMMD1Q8N668 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COMMD1Q8N668 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COMMD1Q8N668 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COMMD1Q8N668 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.06■□□□□ 0.8
COMMD1Q8N668 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
COMMD1Q8N668 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD1Q8N668 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.05■□□□□ 0.8
COMMD1Q8N668 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD1Q8N668 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD1Q8N668 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD1Q8N668 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
COMMD1Q8N668 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.05■□□□□ 0.8
COMMD1Q8N668 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD1Q8N668 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD1Q8N668 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD1Q8N668 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COMMD1Q8N668 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD1Q8N668 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.04■□□□□ 0.8
COMMD1Q8N668 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD1Q8N668 WHAMMP2-203ENST00000563942 1603 ntBASIC20.04■□□□□ 0.8
COMMD1Q8N668 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.04■□□□□ 0.8
COMMD1Q8N668 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COMMD1Q8N668 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD1Q8N668 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD1Q8N668 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD1Q8N668 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD1Q8N668 AC008813.1-201ENST00000536597 885 ntBASIC20.03■□□□□ 0.8
COMMD1Q8N668 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.03■□□□□ 0.8
COMMD1Q8N668 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD1Q8N668 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD1Q8N668 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD1Q8N668 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.03■□□□□ 0.8
COMMD1Q8N668 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD1Q8N668 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD1Q8N668 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD1Q8N668 AC012676.1-201ENST00000574705 1949 ntBASIC20.02■□□□□ 0.8
COMMD1Q8N668 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD1Q8N668 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.02■□□□□ 0.8
COMMD1Q8N668 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD1Q8N668 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
COMMD1Q8N668 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD1Q8N668 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
COMMD1Q8N668 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD1Q8N668 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD1Q8N668 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
COMMD1Q8N668 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20■□□□□ 0.79
COMMD1Q8N668 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD1Q8N668 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20■□□□□ 0.79
COMMD1Q8N668 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20■□□□□ 0.79
COMMD1Q8N668 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20■□□□□ 0.79
COMMD1Q8N668 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 337.3 ms