Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PGBD3Q8N328 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PGBD3Q8N328 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PGBD3Q8N328 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PGBD3Q8N328 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
PGBD3Q8N328 SPCS2P3-201ENST00000500401 656 ntBASIC24.96■■□□□ 1.59
PGBD3Q8N328 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.96■■□□□ 1.59
PGBD3Q8N328 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PGBD3Q8N328 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.95■■□□□ 1.58
PGBD3Q8N328 AC018755.3-202ENST00000596210 929 ntBASIC24.95■■□□□ 1.58
PGBD3Q8N328 MIR6765-201ENST00000614092 87 ntBASIC24.95■■□□□ 1.58
PGBD3Q8N328 AL035685.1-201ENST00000636663 812 ntBASIC24.95■■□□□ 1.58
PGBD3Q8N328 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.95■■□□□ 1.58
PGBD3Q8N328 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
PGBD3Q8N328 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
PGBD3Q8N328 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
PGBD3Q8N328 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PGBD3Q8N328 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.94■■□□□ 1.58
PGBD3Q8N328 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PGBD3Q8N328 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PGBD3Q8N328 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.94■■□□□ 1.58
PGBD3Q8N328 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.94■■□□□ 1.58
PGBD3Q8N328 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PGBD3Q8N328 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.94■■□□□ 1.58
PGBD3Q8N328 AL451085.2-201ENST00000605085 799 ntBASIC24.94■■□□□ 1.58
PGBD3Q8N328 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
PGBD3Q8N328 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PGBD3Q8N328 AC074183.2-201ENST00000623112 922 ntBASIC24.93■■□□□ 1.58
PGBD3Q8N328 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.93■■□□□ 1.58
PGBD3Q8N328 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PGBD3Q8N328 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PGBD3Q8N328 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
PGBD3Q8N328 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.92■■□□□ 1.58
PGBD3Q8N328 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.92■■□□□ 1.58
PGBD3Q8N328 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.91■■□□□ 1.58
PGBD3Q8N328 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PGBD3Q8N328 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PGBD3Q8N328 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PGBD3Q8N328 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PGBD3Q8N328 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.9■■□□□ 1.58
PGBD3Q8N328 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PGBD3Q8N328 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PGBD3Q8N328 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PGBD3Q8N328 YBX1P4-201ENST00000392794 808 ntBASIC24.89■■□□□ 1.58
PGBD3Q8N328 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PGBD3Q8N328 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
PGBD3Q8N328 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.89■■□□□ 1.58
PGBD3Q8N328 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PGBD3Q8N328 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PGBD3Q8N328 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PGBD3Q8N328 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.88■■□□□ 1.57
PGBD3Q8N328 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.88■■□□□ 1.57
PGBD3Q8N328 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PGBD3Q8N328 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
PGBD3Q8N328 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.88■■□□□ 1.57
PGBD3Q8N328 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PGBD3Q8N328 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PGBD3Q8N328 AL359504.2-201ENST00000605506 1601 ntBASIC24.86■■□□□ 1.57
PGBD3Q8N328 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PGBD3Q8N328 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PGBD3Q8N328 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.86■■□□□ 1.57
PGBD3Q8N328 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.86■■□□□ 1.57
PGBD3Q8N328 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.86■■□□□ 1.57
PGBD3Q8N328 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
PGBD3Q8N328 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.85■■□□□ 1.57
PGBD3Q8N328 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PGBD3Q8N328 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.85■■□□□ 1.57
PGBD3Q8N328 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PGBD3Q8N328 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PGBD3Q8N328 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.85■■□□□ 1.57
PGBD3Q8N328 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PGBD3Q8N328 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.84■■□□□ 1.57
PGBD3Q8N328 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
PGBD3Q8N328 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PGBD3Q8N328 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.84■■□□□ 1.57
PGBD3Q8N328 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.84■■□□□ 1.57
PGBD3Q8N328 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
PGBD3Q8N328 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.83■■□□□ 1.57
PGBD3Q8N328 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.83■■□□□ 1.57
PGBD3Q8N328 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
PGBD3Q8N328 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PGBD3Q8N328 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
PGBD3Q8N328 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.82■■□□□ 1.56
PGBD3Q8N328 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PGBD3Q8N328 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PGBD3Q8N328 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.81■■□□□ 1.56
PGBD3Q8N328 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PGBD3Q8N328 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PGBD3Q8N328 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.8■■□□□ 1.56
PGBD3Q8N328 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PGBD3Q8N328 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PGBD3Q8N328 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PGBD3Q8N328 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PGBD3Q8N328 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.79■■□□□ 1.56
PGBD3Q8N328 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PGBD3Q8N328 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.79■■□□□ 1.56
PGBD3Q8N328 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PGBD3Q8N328 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.79■■□□□ 1.56
PGBD3Q8N328 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
PGBD3Q8N328 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms