Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC56Q8IYG6 AC092296.2-201ENST00000589470 999 ntBASIC23.81■■□□□ 1.4
LRRC56Q8IYG6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.81■■□□□ 1.4
LRRC56Q8IYG6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.8■■□□□ 1.4
LRRC56Q8IYG6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
LRRC56Q8IYG6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC56Q8IYG6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC56Q8IYG6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC56Q8IYG6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC56Q8IYG6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC56Q8IYG6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC56Q8IYG6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC56Q8IYG6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC56Q8IYG6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC56Q8IYG6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC56Q8IYG6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC56Q8IYG6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC56Q8IYG6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
LRRC56Q8IYG6 GPX1-201ENST00000419349 1106 ntBASIC23.78■■□□□ 1.4
LRRC56Q8IYG6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC56Q8IYG6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.78■■□□□ 1.4
LRRC56Q8IYG6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC56Q8IYG6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC56Q8IYG6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC56Q8IYG6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC56Q8IYG6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC56Q8IYG6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC56Q8IYG6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC56Q8IYG6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.76■■□□□ 1.39
LRRC56Q8IYG6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC56Q8IYG6 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.76■■□□□ 1.39
LRRC56Q8IYG6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC56Q8IYG6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC56Q8IYG6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC56Q8IYG6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC56Q8IYG6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC56Q8IYG6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.75■■□□□ 1.39
LRRC56Q8IYG6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC56Q8IYG6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC56Q8IYG6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC56Q8IYG6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC56Q8IYG6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC56Q8IYG6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.74■■□□□ 1.39
LRRC56Q8IYG6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.74■■□□□ 1.39
LRRC56Q8IYG6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.73■■□□□ 1.39
LRRC56Q8IYG6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC56Q8IYG6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.73■■□□□ 1.39
LRRC56Q8IYG6 AC025884.2-201ENST00000553429 711 ntBASIC23.73■■□□□ 1.39
LRRC56Q8IYG6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.73■■□□□ 1.39
LRRC56Q8IYG6 ECEL1P2-201ENST00000461596 1295 ntBASIC23.72■■□□□ 1.39
LRRC56Q8IYG6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC56Q8IYG6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.72■■□□□ 1.39
LRRC56Q8IYG6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
LRRC56Q8IYG6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.72■■□□□ 1.39
LRRC56Q8IYG6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC56Q8IYG6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC56Q8IYG6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.71■■□□□ 1.39
LRRC56Q8IYG6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.71■■□□□ 1.39
LRRC56Q8IYG6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.71■■□□□ 1.39
LRRC56Q8IYG6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.39
LRRC56Q8IYG6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRRC56Q8IYG6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRRC56Q8IYG6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LRRC56Q8IYG6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.7■■□□□ 1.38
LRRC56Q8IYG6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
LRRC56Q8IYG6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LRRC56Q8IYG6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LRRC56Q8IYG6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.69■■□□□ 1.38
LRRC56Q8IYG6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.69■■□□□ 1.38
LRRC56Q8IYG6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.69■■□□□ 1.38
LRRC56Q8IYG6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC56Q8IYG6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC56Q8IYG6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC56Q8IYG6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
LRRC56Q8IYG6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
LRRC56Q8IYG6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.67■■□□□ 1.38
LRRC56Q8IYG6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.67■■□□□ 1.38
LRRC56Q8IYG6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRRC56Q8IYG6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.66■■□□□ 1.38
LRRC56Q8IYG6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.66■■□□□ 1.38
LRRC56Q8IYG6 HSD17B1P1-201ENST00000590052 955 ntBASIC23.66■■□□□ 1.38
LRRC56Q8IYG6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC56Q8IYG6 SMPD5-203ENST00000639008 1464 ntBASIC23.65■■□□□ 1.38
LRRC56Q8IYG6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.65■■□□□ 1.38
LRRC56Q8IYG6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.65■■□□□ 1.38
LRRC56Q8IYG6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC56Q8IYG6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.65■■□□□ 1.38
LRRC56Q8IYG6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC56Q8IYG6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
LRRC56Q8IYG6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.64■■□□□ 1.38
LRRC56Q8IYG6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.64■■□□□ 1.38
LRRC56Q8IYG6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
LRRC56Q8IYG6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
LRRC56Q8IYG6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC56Q8IYG6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC56Q8IYG6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC56Q8IYG6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC56Q8IYG6 RNF126P1-201ENST00000567452 1320 ntBASIC23.63■■□□□ 1.37
LRRC56Q8IYG6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.63■■□□□ 1.37
LRRC56Q8IYG6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms