Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.46■■□□□ 1.67
RFX6Q8HWS3 AC145676.1-201ENST00000514988 2004 ntBASIC25.46■■□□□ 1.67
RFX6Q8HWS3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.46■■□□□ 1.67
RFX6Q8HWS3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
RFX6Q8HWS3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.46■■□□□ 1.67
RFX6Q8HWS3 AC092803.2-201ENST00000564287 1899 ntBASIC25.46■■□□□ 1.67
RFX6Q8HWS3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RFX6Q8HWS3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
RFX6Q8HWS3 AC016575.1-201ENST00000607026 382 ntBASIC25.45■■□□□ 1.66
RFX6Q8HWS3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RFX6Q8HWS3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RFX6Q8HWS3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RFX6Q8HWS3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.44■■□□□ 1.66
RFX6Q8HWS3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
RFX6Q8HWS3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RFX6Q8HWS3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RFX6Q8HWS3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RFX6Q8HWS3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RFX6Q8HWS3 AL359258.2-201ENST00000564063 1566 ntBASIC25.43■■□□□ 1.66
RFX6Q8HWS3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RFX6Q8HWS3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RFX6Q8HWS3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RFX6Q8HWS3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.42■■□□□ 1.66
RFX6Q8HWS3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.42■■□□□ 1.66
RFX6Q8HWS3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RFX6Q8HWS3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RFX6Q8HWS3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RFX6Q8HWS3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RFX6Q8HWS3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
RFX6Q8HWS3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RFX6Q8HWS3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
RFX6Q8HWS3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.41■■□□□ 1.66
RFX6Q8HWS3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
RFX6Q8HWS3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RFX6Q8HWS3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
RFX6Q8HWS3 MIR7108-201ENST00000614319 87 ntBASIC25.4■■□□□ 1.66
RFX6Q8HWS3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RFX6Q8HWS3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RFX6Q8HWS3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RFX6Q8HWS3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RFX6Q8HWS3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RFX6Q8HWS3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RFX6Q8HWS3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RFX6Q8HWS3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RFX6Q8HWS3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RFX6Q8HWS3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.39■■□□□ 1.65
RFX6Q8HWS3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.39■■□□□ 1.65
RFX6Q8HWS3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RFX6Q8HWS3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RFX6Q8HWS3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RFX6Q8HWS3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.38■■□□□ 1.65
RFX6Q8HWS3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RFX6Q8HWS3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.37■■□□□ 1.65
RFX6Q8HWS3 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.37■■□□□ 1.65
RFX6Q8HWS3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RFX6Q8HWS3 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.37■■□□□ 1.65
RFX6Q8HWS3 DUSP8P4-201ENST00000399538 1761 ntBASIC25.36■■□□□ 1.65
RFX6Q8HWS3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
RFX6Q8HWS3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RFX6Q8HWS3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RFX6Q8HWS3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
RFX6Q8HWS3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
RFX6Q8HWS3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
RFX6Q8HWS3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RFX6Q8HWS3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
RFX6Q8HWS3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RFX6Q8HWS3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFX6Q8HWS3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFX6Q8HWS3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.34■■□□□ 1.65
RFX6Q8HWS3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFX6Q8HWS3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFX6Q8HWS3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFX6Q8HWS3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RFX6Q8HWS3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.33■■□□□ 1.65
RFX6Q8HWS3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RFX6Q8HWS3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RFX6Q8HWS3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.33■■□□□ 1.65
RFX6Q8HWS3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RFX6Q8HWS3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RFX6Q8HWS3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
RFX6Q8HWS3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.64
RFX6Q8HWS3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
RFX6Q8HWS3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.32■■□□□ 1.64
RFX6Q8HWS3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
RFX6Q8HWS3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
RFX6Q8HWS3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
RFX6Q8HWS3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RFX6Q8HWS3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RFX6Q8HWS3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
RFX6Q8HWS3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.31■■□□□ 1.64
RFX6Q8HWS3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RFX6Q8HWS3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.31■■□□□ 1.64
RFX6Q8HWS3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RFX6Q8HWS3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
RFX6Q8HWS3 AL359504.2-201ENST00000605506 1601 ntBASIC25.3■■□□□ 1.64
RFX6Q8HWS3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RFX6Q8HWS3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RFX6Q8HWS3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.3■■□□□ 1.64
RFX6Q8HWS3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.3■■□□□ 1.64
RFX6Q8HWS3 AC126177.7-201ENST00000547904 679 ntBASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms