Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
RNF180Q86T96 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
RNF180Q86T96 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.66■■■□□ 2.02
RNF180Q86T96 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.66■■■□□ 2.02
RNF180Q86T96 AL359504.2-201ENST00000605506 1601 ntBASIC27.66■■■□□ 2.02
RNF180Q86T96 AL139393.2-201ENST00000608721 2025 ntBASIC27.65■■■□□ 2.02
RNF180Q86T96 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
RNF180Q86T96 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
RNF180Q86T96 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC27.65■■■□□ 2.02
RNF180Q86T96 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.65■■■□□ 2.02
RNF180Q86T96 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RNF180Q86T96 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.64■■■□□ 2.02
RNF180Q86T96 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
RNF180Q86T96 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RNF180Q86T96 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
RNF180Q86T96 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.62■■■□□ 2.01
RNF180Q86T96 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RNF180Q86T96 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.61■■■□□ 2.01
RNF180Q86T96 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
RNF180Q86T96 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
RNF180Q86T96 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
RNF180Q86T96 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RNF180Q86T96 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
RNF180Q86T96 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27.6■■■□□ 2.01
RNF180Q86T96 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC27.6■■■□□ 2.01
RNF180Q86T96 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
RNF180Q86T96 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RNF180Q86T96 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RNF180Q86T96 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC27.59■■■□□ 2.01
RNF180Q86T96 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RNF180Q86T96 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RNF180Q86T96 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
RNF180Q86T96 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.59■■■□□ 2.01
RNF180Q86T96 AC019171.1-201ENST00000601251 1056 ntBASIC27.59■■■□□ 2.01
RNF180Q86T96 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
RNF180Q86T96 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
RNF180Q86T96 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
RNF180Q86T96 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RNF180Q86T96 AL356441.2-201ENST00000443009 864 ntBASIC27.58■■■□□ 2.01
RNF180Q86T96 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RNF180Q86T96 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.58■■■□□ 2.01
RNF180Q86T96 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.58■■■□□ 2.01
RNF180Q86T96 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RNF180Q86T96 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2
RNF180Q86T96 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC27.58■■■□□ 2
RNF180Q86T96 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RNF180Q86T96 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RNF180Q86T96 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RNF180Q86T96 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
RNF180Q86T96 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.56■■■□□ 2
RNF180Q86T96 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.56■■■□□ 2
RNF180Q86T96 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.55■■■□□ 2
RNF180Q86T96 RNF146-205ENST00000477776 762 ntTSL 3 BASIC27.54■■■□□ 2
RNF180Q86T96 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC27.54■■■□□ 2
RNF180Q86T96 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
RNF180Q86T96 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.54■■■□□ 2
RNF180Q86T96 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
RNF180Q86T96 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.53■■■□□ 2
RNF180Q86T96 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RNF180Q86T96 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
RNF180Q86T96 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.53■■■□□ 2
RNF180Q86T96 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RNF180Q86T96 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RNF180Q86T96 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
RNF180Q86T96 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
RNF180Q86T96 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RNF180Q86T96 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RNF180Q86T96 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC27.51■■□□□ 1.99
RNF180Q86T96 AC239859.2-201ENST00000444165 318 ntBASIC27.51■■□□□ 1.99
RNF180Q86T96 AC087393.1-201ENST00000582896 145 ntBASIC27.51■■□□□ 1.99
RNF180Q86T96 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.51■■□□□ 1.99
RNF180Q86T96 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
RNF180Q86T96 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RNF180Q86T96 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
RNF180Q86T96 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC27.5■■□□□ 1.99
RNF180Q86T96 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC27.5■■□□□ 1.99
RNF180Q86T96 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC27.5■■□□□ 1.99
RNF180Q86T96 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
RNF180Q86T96 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
RNF180Q86T96 WHAMMP3-201ENST00000611636 1609 ntBASIC27.49■■□□□ 1.99
RNF180Q86T96 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC27.49■■□□□ 1.99
RNF180Q86T96 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
RNF180Q86T96 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
RNF180Q86T96 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
RNF180Q86T96 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
RNF180Q86T96 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
RNF180Q86T96 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
RNF180Q86T96 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
RNF180Q86T96 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC27.48■■□□□ 1.99
RNF180Q86T96 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
RNF180Q86T96 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC27.46■■□□□ 1.99
RNF180Q86T96 TK2-216ENST00000564917 1156 ntTSL 3 BASIC27.46■■□□□ 1.99
RNF180Q86T96 Z92544.1-202ENST00000571933 1220 ntBASIC27.46■■□□□ 1.99
RNF180Q86T96 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC27.46■■□□□ 1.99
RNF180Q86T96 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.46■■□□□ 1.99
RNF180Q86T96 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
RNF180Q86T96 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC27.45■■□□□ 1.98
RNF180Q86T96 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27.45■■□□□ 1.98
RNF180Q86T96 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
RNF180Q86T96 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms