Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
LCA10Q71F78 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.08□□□□□ -0.32
LCA10Q71F78 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LCA10Q71F78 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LCA10Q71F78 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC13.07□□□□□ -0.32
LCA10Q71F78 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LCA10Q71F78 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC13.07□□□□□ -0.32
LCA10Q71F78 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LCA10Q71F78 DRD5P2-201ENST00000421395 2012 ntBASIC13.07□□□□□ -0.32
LCA10Q71F78 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LCA10Q71F78 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LCA10Q71F78 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LCA10Q71F78 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC13.07□□□□□ -0.32
LCA10Q71F78 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LCA10Q71F78 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LCA10Q71F78 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCA10Q71F78 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC13.06□□□□□ -0.32
LCA10Q71F78 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCA10Q71F78 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCA10Q71F78 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCA10Q71F78 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LCA10Q71F78 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LCA10Q71F78 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCA10Q71F78 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LCA10Q71F78 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LCA10Q71F78 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LCA10Q71F78 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LCA10Q71F78 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LCA10Q71F78 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LCA10Q71F78 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LCA10Q71F78 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
LCA10Q71F78 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LCA10Q71F78 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
LCA10Q71F78 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC13.05□□□□□ -0.32
LCA10Q71F78 AC091060.1-201ENST00000623524 1766 ntBASIC13.04□□□□□ -0.32
LCA10Q71F78 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LCA10Q71F78 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LCA10Q71F78 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LCA10Q71F78 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LCA10Q71F78 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LCA10Q71F78 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LCA10Q71F78 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LCA10Q71F78 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LCA10Q71F78 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LCA10Q71F78 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC13.03□□□□□ -0.32
LCA10Q71F78 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LCA10Q71F78 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
LCA10Q71F78 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LCA10Q71F78 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LCA10Q71F78 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LCA10Q71F78 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LCA10Q71F78 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
LCA10Q71F78 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC13.03□□□□□ -0.32
LCA10Q71F78 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LCA10Q71F78 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LCA10Q71F78 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC13.02□□□□□ -0.32
LCA10Q71F78 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LCA10Q71F78 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
LCA10Q71F78 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LCA10Q71F78 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC13.02□□□□□ -0.33
LCA10Q71F78 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC13.02□□□□□ -0.33
LCA10Q71F78 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LCA10Q71F78 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LCA10Q71F78 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LCA10Q71F78 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LCA10Q71F78 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LCA10Q71F78 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC13.02□□□□□ -0.33
LCA10Q71F78 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LCA10Q71F78 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCA10Q71F78 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCA10Q71F78 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC13.01□□□□□ -0.33
LCA10Q71F78 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCA10Q71F78 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCA10Q71F78 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LCA10Q71F78 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCA10Q71F78 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC13.01□□□□□ -0.33
LCA10Q71F78 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCA10Q71F78 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCA10Q71F78 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LCA10Q71F78 CASK-201ENST00000378154 2494 ntTSL 5 BASIC13□□□□□ -0.33
LCA10Q71F78 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC13□□□□□ -0.33
LCA10Q71F78 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LCA10Q71F78 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC13□□□□□ -0.33
LCA10Q71F78 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LCA10Q71F78 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LCA10Q71F78 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC12.99□□□□□ -0.33
LCA10Q71F78 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LCA10Q71F78 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LCA10Q71F78 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LCA10Q71F78 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LCA10Q71F78 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LCA10Q71F78 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LCA10Q71F78 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LCA10Q71F78 WASH5P-204ENST00000632292 975 ntBASIC12.99□□□□□ -0.33
LCA10Q71F78 USP48-205ENST00000421625 2818 ntTSL 2 BASIC12.99□□□□□ -0.33
LCA10Q71F78 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LCA10Q71F78 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LCA10Q71F78 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC12.99□□□□□ -0.33
LCA10Q71F78 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LCA10Q71F78 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms