Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.52■■□□□ 1.04
HIST2H3AQ71DI3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.52■■□□□ 1.03
HIST2H3AQ71DI3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIST2H3AQ71DI3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HIST2H3AQ71DI3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIST2H3AQ71DI3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HIST2H3AQ71DI3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIST2H3AQ71DI3 AL359258.2-201ENST00000564063 1566 ntBASIC21.51■■□□□ 1.03
HIST2H3AQ71DI3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HIST2H3AQ71DI3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HIST2H3AQ71DI3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST2H3AQ71DI3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST2H3AQ71DI3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.5■■□□□ 1.03
HIST2H3AQ71DI3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST2H3AQ71DI3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST2H3AQ71DI3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.5■■□□□ 1.03
HIST2H3AQ71DI3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST2H3AQ71DI3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST2H3AQ71DI3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HIST2H3AQ71DI3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HIST2H3AQ71DI3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
HIST2H3AQ71DI3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HIST2H3AQ71DI3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HIST2H3AQ71DI3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIST2H3AQ71DI3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIST2H3AQ71DI3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HIST2H3AQ71DI3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.48■■□□□ 1.03
HIST2H3AQ71DI3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIST2H3AQ71DI3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
HIST2H3AQ71DI3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIST2H3AQ71DI3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HIST2H3AQ71DI3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HIST2H3AQ71DI3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIST2H3AQ71DI3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIST2H3AQ71DI3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.46■■□□□ 1.03
HIST2H3AQ71DI3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.46■■□□□ 1.03
HIST2H3AQ71DI3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST2H3AQ71DI3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.46■■□□□ 1.03
HIST2H3AQ71DI3 MIR639-201ENST00000384974 98 ntBASIC21.46■■□□□ 1.03
HIST2H3AQ71DI3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.46■■□□□ 1.03
HIST2H3AQ71DI3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.46■■□□□ 1.03
HIST2H3AQ71DI3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST2H3AQ71DI3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
HIST2H3AQ71DI3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST2H3AQ71DI3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HIST2H3AQ71DI3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HIST2H3AQ71DI3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HIST2H3AQ71DI3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.45■■□□□ 1.02
HIST2H3AQ71DI3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HIST2H3AQ71DI3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HIST2H3AQ71DI3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HIST2H3AQ71DI3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HIST2H3AQ71DI3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HIST2H3AQ71DI3 AC145676.1-201ENST00000514988 2004 ntBASIC21.45■■□□□ 1.02
HIST2H3AQ71DI3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HIST2H3AQ71DI3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HIST2H3AQ71DI3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HIST2H3AQ71DI3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HIST2H3AQ71DI3 AC092803.2-201ENST00000564287 1899 ntBASIC21.44■■□□□ 1.02
HIST2H3AQ71DI3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.44■■□□□ 1.02
HIST2H3AQ71DI3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIST2H3AQ71DI3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
HIST2H3AQ71DI3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIST2H3AQ71DI3 AC126177.7-201ENST00000547904 679 ntBASIC21.43■■□□□ 1.02
HIST2H3AQ71DI3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIST2H3AQ71DI3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HIST2H3AQ71DI3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIST2H3AQ71DI3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIST2H3AQ71DI3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HIST2H3AQ71DI3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HIST2H3AQ71DI3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIST2H3AQ71DI3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HIST2H3AQ71DI3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.42■■□□□ 1.02
HIST2H3AQ71DI3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.42■■□□□ 1.02
HIST2H3AQ71DI3 AL359504.2-201ENST00000605506 1601 ntBASIC21.42■■□□□ 1.02
HIST2H3AQ71DI3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HIST2H3AQ71DI3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIST2H3AQ71DI3 DUSP8P4-201ENST00000399538 1761 ntBASIC21.41■■□□□ 1.02
HIST2H3AQ71DI3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.41■■□□□ 1.02
HIST2H3AQ71DI3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIST2H3AQ71DI3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.41■■□□□ 1.02
HIST2H3AQ71DI3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.41■■□□□ 1.02
HIST2H3AQ71DI3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HIST2H3AQ71DI3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIST2H3AQ71DI3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.4■■□□□ 1.02
HIST2H3AQ71DI3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HIST2H3AQ71DI3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIST2H3AQ71DI3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
HIST2H3AQ71DI3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.39■■□□□ 1.02
HIST2H3AQ71DI3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HIST2H3AQ71DI3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
HIST2H3AQ71DI3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HIST2H3AQ71DI3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HIST2H3AQ71DI3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.38■■□□□ 1.01
HIST2H3AQ71DI3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HIST2H3AQ71DI3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HIST2H3AQ71DI3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HIST2H3AQ71DI3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HIST2H3AQ71DI3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HIST2H3AQ71DI3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms