Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
LPCAT4Q643R3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LPCAT4Q643R3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.14■■□□□ 1.29
LPCAT4Q643R3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LPCAT4Q643R3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.14■■□□□ 1.29
LPCAT4Q643R3 AC012676.1-201ENST00000574705 1949 ntBASIC23.14■■□□□ 1.29
LPCAT4Q643R3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
LPCAT4Q643R3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.13■■□□□ 1.29
LPCAT4Q643R3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LPCAT4Q643R3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LPCAT4Q643R3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LPCAT4Q643R3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LPCAT4Q643R3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LPCAT4Q643R3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.12■■□□□ 1.29
LPCAT4Q643R3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.11■■□□□ 1.29
LPCAT4Q643R3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LPCAT4Q643R3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LPCAT4Q643R3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LPCAT4Q643R3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LPCAT4Q643R3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LPCAT4Q643R3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
LPCAT4Q643R3 AC022211.4-201ENST00000625094 2161 ntBASIC23.08■■□□□ 1.29
LPCAT4Q643R3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
LPCAT4Q643R3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
LPCAT4Q643R3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.08■■□□□ 1.29
LPCAT4Q643R3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LPCAT4Q643R3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LPCAT4Q643R3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
LPCAT4Q643R3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
LPCAT4Q643R3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LPCAT4Q643R3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LPCAT4Q643R3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LPCAT4Q643R3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
LPCAT4Q643R3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LPCAT4Q643R3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
LPCAT4Q643R3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.06■■□□□ 1.28
LPCAT4Q643R3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LPCAT4Q643R3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.06■■□□□ 1.28
LPCAT4Q643R3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LPCAT4Q643R3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LPCAT4Q643R3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.05■■□□□ 1.28
LPCAT4Q643R3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.05■■□□□ 1.28
LPCAT4Q643R3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.05■■□□□ 1.28
LPCAT4Q643R3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LPCAT4Q643R3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LPCAT4Q643R3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LPCAT4Q643R3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LPCAT4Q643R3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LPCAT4Q643R3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LPCAT4Q643R3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
LPCAT4Q643R3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LPCAT4Q643R3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LPCAT4Q643R3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LPCAT4Q643R3 AC068473.5-201ENST00000616428 2072 ntBASIC23.03■■□□□ 1.28
LPCAT4Q643R3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
LPCAT4Q643R3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LPCAT4Q643R3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
LPCAT4Q643R3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.02■■□□□ 1.28
LPCAT4Q643R3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LPCAT4Q643R3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LPCAT4Q643R3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
LPCAT4Q643R3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LPCAT4Q643R3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LPCAT4Q643R3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LPCAT4Q643R3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LPCAT4Q643R3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.01■■□□□ 1.27
LPCAT4Q643R3 AC142472.1-201ENST00000612013 1741 ntBASIC23.01■■□□□ 1.27
LPCAT4Q643R3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LPCAT4Q643R3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23■■□□□ 1.27
LPCAT4Q643R3 AC010501.1-201ENST00000606270 1962 ntBASIC23■■□□□ 1.27
LPCAT4Q643R3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23■■□□□ 1.27
LPCAT4Q643R3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LPCAT4Q643R3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LPCAT4Q643R3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.99■■□□□ 1.27
LPCAT4Q643R3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LPCAT4Q643R3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LPCAT4Q643R3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LPCAT4Q643R3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LPCAT4Q643R3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LPCAT4Q643R3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
LPCAT4Q643R3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.97■■□□□ 1.27
LPCAT4Q643R3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.97■■□□□ 1.27
LPCAT4Q643R3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC22.97■■□□□ 1.27
LPCAT4Q643R3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LPCAT4Q643R3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LPCAT4Q643R3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.96■■□□□ 1.27
LPCAT4Q643R3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LPCAT4Q643R3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LPCAT4Q643R3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LPCAT4Q643R3 AC135983.2-203ENST00000454486 1613 ntBASIC22.96■■□□□ 1.27
LPCAT4Q643R3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LPCAT4Q643R3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.96■■□□□ 1.27
LPCAT4Q643R3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
LPCAT4Q643R3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.95■■□□□ 1.26
LPCAT4Q643R3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LPCAT4Q643R3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
LPCAT4Q643R3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LPCAT4Q643R3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LPCAT4Q643R3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
LPCAT4Q643R3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms