Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC35.98■■■■□ 3.35
SPHKAPQ2M3C7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC35.98■■■■□ 3.35
SPHKAPQ2M3C7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC35.98■■■■□ 3.35
SPHKAPQ2M3C7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC35.98■■■■□ 3.35
SPHKAPQ2M3C7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
SPHKAPQ2M3C7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
SPHKAPQ2M3C7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC35.96■■■■□ 3.35
SPHKAPQ2M3C7 PVT1_1.1-201ENST00000615125 194 ntBASIC35.96■■■■□ 3.35
SPHKAPQ2M3C7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
SPHKAPQ2M3C7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC35.95■■■■□ 3.34
SPHKAPQ2M3C7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
SPHKAPQ2M3C7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
SPHKAPQ2M3C7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
SPHKAPQ2M3C7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
SPHKAPQ2M3C7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC35.94■■■■□ 3.34
SPHKAPQ2M3C7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC35.94■■■■□ 3.34
SPHKAPQ2M3C7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
SPHKAPQ2M3C7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC35.94■■■■□ 3.34
SPHKAPQ2M3C7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC35.93■■■■□ 3.34
SPHKAPQ2M3C7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC35.93■■■■□ 3.34
SPHKAPQ2M3C7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC35.93■■■■□ 3.34
SPHKAPQ2M3C7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC35.93■■■■□ 3.34
SPHKAPQ2M3C7 DRD5P2-201ENST00000421395 2012 ntBASIC35.93■■■■□ 3.34
SPHKAPQ2M3C7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
SPHKAPQ2M3C7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC35.92■■■■□ 3.34
SPHKAPQ2M3C7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC35.92■■■■□ 3.34
SPHKAPQ2M3C7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC35.91■■■■□ 3.34
SPHKAPQ2M3C7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC35.91■■■■□ 3.34
SPHKAPQ2M3C7 AC010980.1-201ENST00000587192 1142 ntBASIC35.91■■■■□ 3.34
SPHKAPQ2M3C7 AL035685.1-201ENST00000636663 812 ntBASIC35.91■■■■□ 3.34
SPHKAPQ2M3C7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC35.91■■■■□ 3.34
SPHKAPQ2M3C7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC35.91■■■■□ 3.34
SPHKAPQ2M3C7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC35.91■■■■□ 3.34
SPHKAPQ2M3C7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC35.9■■■■□ 3.34
SPHKAPQ2M3C7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
SPHKAPQ2M3C7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC35.9■■■■□ 3.34
SPHKAPQ2M3C7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
SPHKAPQ2M3C7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC35.89■■■■□ 3.34
SPHKAPQ2M3C7 AC139795.1-202ENST00000500444 432 ntBASIC35.89■■■■□ 3.34
SPHKAPQ2M3C7 MIR4508-201ENST00000584178 70 ntBASIC35.88■■■■□ 3.34
SPHKAPQ2M3C7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
SPHKAPQ2M3C7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
SPHKAPQ2M3C7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC35.87■■■■□ 3.33
SPHKAPQ2M3C7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC35.87■■■■□ 3.33
SPHKAPQ2M3C7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
SPHKAPQ2M3C7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
SPHKAPQ2M3C7 AC009299.2-201ENST00000482477 511 ntBASIC35.85■■■■□ 3.33
SPHKAPQ2M3C7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC35.85■■■■□ 3.33
SPHKAPQ2M3C7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC35.85■■■■□ 3.33
SPHKAPQ2M3C7 KRT8P33-201ENST00000508125 1423 ntBASIC35.84■■■■□ 3.33
SPHKAPQ2M3C7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
SPHKAPQ2M3C7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC35.84■■■■□ 3.33
SPHKAPQ2M3C7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
SPHKAPQ2M3C7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
SPHKAPQ2M3C7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
SPHKAPQ2M3C7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC35.84■■■■□ 3.33
SPHKAPQ2M3C7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
SPHKAPQ2M3C7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
SPHKAPQ2M3C7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC35.84■■■■□ 3.33
SPHKAPQ2M3C7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC35.84■■■■□ 3.33
SPHKAPQ2M3C7 HYI-210ENST00000486909 905 ntTSL 5 BASIC35.83■■■■□ 3.33
SPHKAPQ2M3C7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC35.83■■■■□ 3.33
SPHKAPQ2M3C7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC35.83■■■■□ 3.33
SPHKAPQ2M3C7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC35.83■■■■□ 3.33
SPHKAPQ2M3C7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC35.83■■■■□ 3.33
SPHKAPQ2M3C7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
SPHKAPQ2M3C7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
SPHKAPQ2M3C7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC35.81■■■■□ 3.32
SPHKAPQ2M3C7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC35.81■■■■□ 3.32
SPHKAPQ2M3C7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC35.8■■■■□ 3.32
SPHKAPQ2M3C7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC35.8■■■■□ 3.32
SPHKAPQ2M3C7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC35.8■■■■□ 3.32
SPHKAPQ2M3C7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC35.8■■■■□ 3.32
SPHKAPQ2M3C7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC35.79■■■■□ 3.32
SPHKAPQ2M3C7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC35.79■■■■□ 3.32
SPHKAPQ2M3C7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC35.78■■■■□ 3.32
SPHKAPQ2M3C7 AC074183.2-201ENST00000623112 922 ntBASIC35.78■■■■□ 3.32
SPHKAPQ2M3C7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
SPHKAPQ2M3C7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC35.78■■■■□ 3.32
SPHKAPQ2M3C7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
SPHKAPQ2M3C7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC35.78■■■■□ 3.32
SPHKAPQ2M3C7 AC103724.3-201ENST00000564481 992 ntBASIC35.77■■■■□ 3.32
SPHKAPQ2M3C7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
SPHKAPQ2M3C7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
SPHKAPQ2M3C7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC35.77■■■■□ 3.32
SPHKAPQ2M3C7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
SPHKAPQ2M3C7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC35.76■■■■□ 3.32
SPHKAPQ2M3C7 AC103834.1-201ENST00000520383 144 ntBASIC35.76■■■■□ 3.31
SPHKAPQ2M3C7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC35.75■■■■□ 3.31
SPHKAPQ2M3C7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC35.75■■■■□ 3.31
SPHKAPQ2M3C7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC35.74■■■■□ 3.31
SPHKAPQ2M3C7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC35.74■■■■□ 3.31
SPHKAPQ2M3C7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC35.74■■■■□ 3.31
SPHKAPQ2M3C7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC35.74■■■■□ 3.31
SPHKAPQ2M3C7 AL449106.1-201ENST00000608517 1980 ntBASIC35.73■■■■□ 3.31
SPHKAPQ2M3C7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
SPHKAPQ2M3C7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC35.73■■■■□ 3.31
SPHKAPQ2M3C7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
SPHKAPQ2M3C7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC35.73■■■■□ 3.31
SPHKAPQ2M3C7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms