Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D28Q2M2D7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TBC1D28Q2M2D7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TBC1D28Q2M2D7 ECEL1P2-201ENST00000461596 1295 ntBASIC21.33■■□□□ 1.01
TBC1D28Q2M2D7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.33■■□□□ 1.01
TBC1D28Q2M2D7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TBC1D28Q2M2D7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TBC1D28Q2M2D7 HSD17B1P1-201ENST00000590052 955 ntBASIC21.33■■□□□ 1.01
TBC1D28Q2M2D7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.33■■□□□ 1.01
TBC1D28Q2M2D7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TBC1D28Q2M2D7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.33■■□□□ 1
TBC1D28Q2M2D7 AL359504.2-201ENST00000605506 1601 ntBASIC21.33■■□□□ 1
TBC1D28Q2M2D7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TBC1D28Q2M2D7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TBC1D28Q2M2D7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.32■■□□□ 1
TBC1D28Q2M2D7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
TBC1D28Q2M2D7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D28Q2M2D7 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.31■■□□□ 1
TBC1D28Q2M2D7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D28Q2M2D7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D28Q2M2D7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.31■■□□□ 1
TBC1D28Q2M2D7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D28Q2M2D7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.3■■□□□ 1
TBC1D28Q2M2D7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.3■■□□□ 1
TBC1D28Q2M2D7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.3■■□□□ 1
TBC1D28Q2M2D7 RNF126P1-201ENST00000567452 1320 ntBASIC21.29■■□□□ 1
TBC1D28Q2M2D7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TBC1D28Q2M2D7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TBC1D28Q2M2D7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.29■■□□□ 1
TBC1D28Q2M2D7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.28■■□□□ 1
TBC1D28Q2M2D7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
TBC1D28Q2M2D7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D28Q2M2D7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D28Q2M2D7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.28■■□□□ 1
TBC1D28Q2M2D7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.28■■□□□ 1
TBC1D28Q2M2D7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D28Q2M2D7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.28■■□□□ 1
TBC1D28Q2M2D7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D28Q2M2D7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.28■■□□□ 1
TBC1D28Q2M2D7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D28Q2M2D7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D28Q2M2D7 SMPD5-203ENST00000639008 1464 ntBASIC21.27■■□□□ 1
TBC1D28Q2M2D7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D28Q2M2D7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.26■□□□□ 0.99
TBC1D28Q2M2D7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TBC1D28Q2M2D7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
TBC1D28Q2M2D7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D28Q2M2D7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D28Q2M2D7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D28Q2M2D7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.24■□□□□ 0.99
TBC1D28Q2M2D7 AC025884.2-201ENST00000553429 711 ntBASIC21.24■□□□□ 0.99
TBC1D28Q2M2D7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D28Q2M2D7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D28Q2M2D7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D28Q2M2D7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.24■□□□□ 0.99
TBC1D28Q2M2D7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
TBC1D28Q2M2D7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
TBC1D28Q2M2D7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.23■□□□□ 0.99
TBC1D28Q2M2D7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.23■□□□□ 0.99
TBC1D28Q2M2D7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.23■□□□□ 0.99
TBC1D28Q2M2D7 MIR3960-201ENST00000583311 91 ntBASIC21.23■□□□□ 0.99
TBC1D28Q2M2D7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TBC1D28Q2M2D7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TBC1D28Q2M2D7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TBC1D28Q2M2D7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TBC1D28Q2M2D7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TBC1D28Q2M2D7 RARRES2P2-201ENST00000394842 485 ntBASIC21.22■□□□□ 0.99
TBC1D28Q2M2D7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.22■□□□□ 0.99
TBC1D28Q2M2D7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.22■□□□□ 0.99
TBC1D28Q2M2D7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
TBC1D28Q2M2D7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.22■□□□□ 0.99
TBC1D28Q2M2D7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TBC1D28Q2M2D7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TBC1D28Q2M2D7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TBC1D28Q2M2D7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.21■□□□□ 0.99
TBC1D28Q2M2D7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.21■□□□□ 0.99
TBC1D28Q2M2D7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.21■□□□□ 0.99
TBC1D28Q2M2D7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
TBC1D28Q2M2D7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TBC1D28Q2M2D7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TBC1D28Q2M2D7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TBC1D28Q2M2D7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TBC1D28Q2M2D7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.2■□□□□ 0.98
TBC1D28Q2M2D7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.2■□□□□ 0.98
TBC1D28Q2M2D7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TBC1D28Q2M2D7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TBC1D28Q2M2D7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.19■□□□□ 0.98
TBC1D28Q2M2D7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TBC1D28Q2M2D7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TBC1D28Q2M2D7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.19■□□□□ 0.98
TBC1D28Q2M2D7 AC007029.1-201ENST00000604183 313 ntBASIC21.19■□□□□ 0.98
TBC1D28Q2M2D7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TBC1D28Q2M2D7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TBC1D28Q2M2D7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TBC1D28Q2M2D7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TBC1D28Q2M2D7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TBC1D28Q2M2D7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TBC1D28Q2M2D7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.18■□□□□ 0.98
TBC1D28Q2M2D7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TBC1D28Q2M2D7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms