Protein–RNA interactions for Protein: P78371

CCT2, T-complex protein 1 subunit beta, humanhuman

Known RBP Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2P78371 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.8■■■□□ 2.2
CCT2P78371 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.79■■■□□ 2.2
CCT2P78371 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.79■■■□□ 2.2
CCT2P78371 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCT2P78371 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CCT2P78371 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CCT2P78371 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.77■■■□□ 2.2
CCT2P78371 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CCT2P78371 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.77■■■□□ 2.2
CCT2P78371 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CCT2P78371 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CCT2P78371 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC28.77■■■□□ 2.2
CCT2P78371 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCT2P78371 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCT2P78371 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCT2P78371 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CCT2P78371 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CCT2P78371 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CCT2P78371 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCT2P78371 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CCT2P78371 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
CCT2P78371 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CCT2P78371 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CCT2P78371 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCT2P78371 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCT2P78371 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCT2P78371 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CCT2P78371 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.75■■■□□ 2.19
CCT2P78371 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CCT2P78371 AC091060.1-201ENST00000623524 1766 ntBASIC28.75■■■□□ 2.19
CCT2P78371 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CCT2P78371 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.74■■■□□ 2.19
CCT2P78371 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CCT2P78371 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCT2P78371 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCT2P78371 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCT2P78371 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CCT2P78371 AL359504.2-201ENST00000605506 1601 ntBASIC28.72■■■□□ 2.19
CCT2P78371 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCT2P78371 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
CCT2P78371 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.71■■■□□ 2.19
CCT2P78371 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.71■■■□□ 2.19
CCT2P78371 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CCT2P78371 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
CCT2P78371 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CCT2P78371 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
CCT2P78371 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
CCT2P78371 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
CCT2P78371 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CCT2P78371 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CCT2P78371 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CCT2P78371 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
CCT2P78371 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
CCT2P78371 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.68■■■□□ 2.18
CCT2P78371 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
CCT2P78371 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CCT2P78371 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
CCT2P78371 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CCT2P78371 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CCT2P78371 AC126177.7-201ENST00000547904 679 ntBASIC28.67■■■□□ 2.18
CCT2P78371 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.67■■■□□ 2.18
CCT2P78371 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.67■■■□□ 2.18
CCT2P78371 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.67■■■□□ 2.18
CCT2P78371 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CCT2P78371 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.66■■■□□ 2.18
CCT2P78371 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CCT2P78371 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC28.66■■■□□ 2.18
CCT2P78371 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.66■■■□□ 2.18
CCT2P78371 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.66■■■□□ 2.18
CCT2P78371 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.66■■■□□ 2.18
CCT2P78371 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CCT2P78371 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CCT2P78371 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CCT2P78371 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CCT2P78371 MIR4449-201ENST00000578365 66 ntBASIC28.65■■■□□ 2.18
CCT2P78371 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.65■■■□□ 2.18
CCT2P78371 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CCT2P78371 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.64■■■□□ 2.18
CCT2P78371 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC28.64■■■□□ 2.18
CCT2P78371 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CCT2P78371 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.64■■■□□ 2.18
CCT2P78371 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
CCT2P78371 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC28.64■■■□□ 2.17
CCT2P78371 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.63■■■□□ 2.17
CCT2P78371 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.62■■■□□ 2.17
CCT2P78371 AC092803.2-201ENST00000564287 1899 ntBASIC28.62■■■□□ 2.17
CCT2P78371 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.62■■■□□ 2.17
CCT2P78371 AC060814.1-201ENST00000554326 538 ntBASIC28.62■■■□□ 2.17
CCT2P78371 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.62■■■□□ 2.17
CCT2P78371 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
CCT2P78371 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CCT2P78371 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CCT2P78371 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CCT2P78371 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
CCT2P78371 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
CCT2P78371 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CCT2P78371 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CCT2P78371 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CCT2P78371 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
CCT2P78371 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms