Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPL13AP40429 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPL13AP40429 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPL13AP40429 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPL13AP40429 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPL13AP40429 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPL13AP40429 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPL13AP40429 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPL13AP40429 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC16.88■□□□□ 0.29
RPL13AP40429 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPL13AP40429 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPL13AP40429 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPL13AP40429 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.88■□□□□ 0.29
RPL13AP40429 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC16.87■□□□□ 0.29
RPL13AP40429 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPL13AP40429 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC16.87■□□□□ 0.29
RPL13AP40429 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RPL13AP40429 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RPL13AP40429 PROC-203ENST00000409048 1586 ntTSL 5 BASIC16.87■□□□□ 0.29
RPL13AP40429 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
RPL13AP40429 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC16.87■□□□□ 0.29
RPL13AP40429 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC16.87■□□□□ 0.29
RPL13AP40429 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
RPL13AP40429 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPL13AP40429 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPL13AP40429 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPL13AP40429 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RPL13AP40429 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPL13AP40429 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPL13AP40429 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.86■□□□□ 0.29
RPL13AP40429 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPL13AP40429 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPL13AP40429 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPL13AP40429 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RPL13AP40429 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RPL13AP40429 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPL13AP40429 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPL13AP40429 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC16.85■□□□□ 0.29
RPL13AP40429 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RPL13AP40429 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPL13AP40429 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPL13AP40429 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPL13AP40429 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPL13AP40429 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RPL13AP40429 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RPL13AP40429 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.84■□□□□ 0.29
RPL13AP40429 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPL13AP40429 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RPL13AP40429 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC16.84■□□□□ 0.29
RPL13AP40429 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPL13AP40429 LINC01003-201ENST00000564834 1764 ntBASIC16.84■□□□□ 0.29
RPL13AP40429 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPL13AP40429 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPL13AP40429 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPL13AP40429 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPL13AP40429 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPL13AP40429 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPL13AP40429 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
RPL13AP40429 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPL13AP40429 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.83■□□□□ 0.28
RPL13AP40429 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPL13AP40429 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC16.83■□□□□ 0.28
RPL13AP40429 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RPL13AP40429 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RPL13AP40429 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPL13AP40429 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPL13AP40429 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.82■□□□□ 0.28
RPL13AP40429 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPL13AP40429 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC16.82■□□□□ 0.28
RPL13AP40429 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC16.82■□□□□ 0.28
RPL13AP40429 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPL13AP40429 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPL13AP40429 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.81■□□□□ 0.28
RPL13AP40429 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPL13AP40429 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPL13AP40429 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
RPL13AP40429 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RPL13AP40429 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC16.81■□□□□ 0.28
RPL13AP40429 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPL13AP40429 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPL13AP40429 LINC00543-201ENST00000567234 1845 ntBASIC16.8■□□□□ 0.28
RPL13AP40429 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPL13AP40429 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPL13AP40429 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RPL13AP40429 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RPL13AP40429 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.8■□□□□ 0.28
RPL13AP40429 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPL13AP40429 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.79■□□□□ 0.28
RPL13AP40429 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPL13AP40429 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPL13AP40429 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPL13AP40429 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RPL13AP40429 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPL13AP40429 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPL13AP40429 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPL13AP40429 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPL13AP40429 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPL13AP40429 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.79■□□□□ 0.28
RPL13AP40429 AC145676.1-201ENST00000514988 2004 ntBASIC16.79■□□□□ 0.28
RPL13AP40429 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms