Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AC092296.2-201ENST00000589470 999 ntBASIC19.94■□□□□ 0.78
CEACAM3P40198 AP004609.3-201ENST00000610705 1884 ntBASIC19.94■□□□□ 0.78
CEACAM3P40198 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CEACAM3P40198 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CEACAM3P40198 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CEACAM3P40198 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.92■□□□□ 0.78
CEACAM3P40198 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.92■□□□□ 0.78
CEACAM3P40198 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CEACAM3P40198 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CEACAM3P40198 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.92■□□□□ 0.78
CEACAM3P40198 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CEACAM3P40198 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CEACAM3P40198 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.91■□□□□ 0.78
CEACAM3P40198 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CEACAM3P40198 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CEACAM3P40198 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CEACAM3P40198 RNF126P1-201ENST00000567452 1320 ntBASIC19.91■□□□□ 0.78
CEACAM3P40198 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.91■□□□□ 0.78
CEACAM3P40198 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CEACAM3P40198 AL359504.2-201ENST00000605506 1601 ntBASIC19.91■□□□□ 0.78
CEACAM3P40198 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CEACAM3P40198 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CEACAM3P40198 AL157400.5-201ENST00000507624 621 ntBASIC19.9■□□□□ 0.78
CEACAM3P40198 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CEACAM3P40198 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CEACAM3P40198 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CEACAM3P40198 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.9■□□□□ 0.78
CEACAM3P40198 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CEACAM3P40198 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CEACAM3P40198 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.89■□□□□ 0.77
CEACAM3P40198 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CEACAM3P40198 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CEACAM3P40198 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.89■□□□□ 0.77
CEACAM3P40198 HSD17B1P1-201ENST00000590052 955 ntBASIC19.89■□□□□ 0.77
CEACAM3P40198 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.89■□□□□ 0.77
CEACAM3P40198 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CEACAM3P40198 AL121749.1-202ENST00000609313 2153 ntBASIC19.88■□□□□ 0.77
CEACAM3P40198 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CEACAM3P40198 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CEACAM3P40198 SMPD5-203ENST00000639008 1464 ntBASIC19.88■□□□□ 0.77
CEACAM3P40198 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CEACAM3P40198 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CEACAM3P40198 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CEACAM3P40198 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CEACAM3P40198 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CEACAM3P40198 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CEACAM3P40198 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CEACAM3P40198 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.86■□□□□ 0.77
CEACAM3P40198 MIR3960-201ENST00000583311 91 ntBASIC19.86■□□□□ 0.77
CEACAM3P40198 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CEACAM3P40198 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CEACAM3P40198 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CEACAM3P40198 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
CEACAM3P40198 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CEACAM3P40198 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.85■□□□□ 0.77
CEACAM3P40198 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CEACAM3P40198 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CEACAM3P40198 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CEACAM3P40198 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CEACAM3P40198 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CEACAM3P40198 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CEACAM3P40198 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CEACAM3P40198 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.84■□□□□ 0.77
CEACAM3P40198 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CEACAM3P40198 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CEACAM3P40198 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CEACAM3P40198 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CEACAM3P40198 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CEACAM3P40198 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CEACAM3P40198 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.83■□□□□ 0.77
CEACAM3P40198 AC025884.2-201ENST00000553429 711 ntBASIC19.83■□□□□ 0.77
CEACAM3P40198 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.83■□□□□ 0.77
CEACAM3P40198 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CEACAM3P40198 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CEACAM3P40198 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CEACAM3P40198 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CEACAM3P40198 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CEACAM3P40198 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CEACAM3P40198 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.82■□□□□ 0.76
CEACAM3P40198 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CEACAM3P40198 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.82■□□□□ 0.76
CEACAM3P40198 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CEACAM3P40198 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CEACAM3P40198 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CEACAM3P40198 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.82■□□□□ 0.76
CEACAM3P40198 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.81■□□□□ 0.76
CEACAM3P40198 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
CEACAM3P40198 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CEACAM3P40198 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.8■□□□□ 0.76
CEACAM3P40198 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CEACAM3P40198 RARRES2P2-201ENST00000394842 485 ntBASIC19.8■□□□□ 0.76
CEACAM3P40198 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CEACAM3P40198 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CEACAM3P40198 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.8■□□□□ 0.76
CEACAM3P40198 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CEACAM3P40198 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CEACAM3P40198 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CEACAM3P40198 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CEACAM3P40198 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CEACAM3P40198 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms