Protein–RNA interactions for Protein: P33991

MCM4, DNA replication licensing factor MCM4, humanhuman

Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4P33991 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
MCM4P33991 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
MCM4P33991 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
MCM4P33991 AC135983.2-203ENST00000454486 1613 ntBASIC28.82■■■□□ 2.2
MCM4P33991 PREB-202ENST00000406567 1910 ntTSL 5 BASIC28.82■■■□□ 2.2
MCM4P33991 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
MCM4P33991 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC28.81■■■□□ 2.2
MCM4P33991 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.81■■■□□ 2.2
MCM4P33991 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
MCM4P33991 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
MCM4P33991 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
MCM4P33991 TMEM202-AS1-202ENST00000565181 2325 ntBASIC28.8■■■□□ 2.2
MCM4P33991 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.79■■■□□ 2.2
MCM4P33991 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC28.79■■■□□ 2.2
MCM4P33991 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
MCM4P33991 AC142381.3-201ENST00000568208 1670 ntBASIC28.78■■■□□ 2.2
MCM4P33991 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
MCM4P33991 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
MCM4P33991 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
MCM4P33991 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
MCM4P33991 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
MCM4P33991 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
MCM4P33991 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.77■■■□□ 2.2
MCM4P33991 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
MCM4P33991 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
MCM4P33991 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
MCM4P33991 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
MCM4P33991 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
MCM4P33991 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
MCM4P33991 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.76■■■□□ 2.19
MCM4P33991 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
MCM4P33991 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
MCM4P33991 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
MCM4P33991 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
MCM4P33991 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
MCM4P33991 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.75■■■□□ 2.19
MCM4P33991 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
MCM4P33991 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
MCM4P33991 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.74■■■□□ 2.19
MCM4P33991 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
MCM4P33991 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC28.73■■■□□ 2.19
MCM4P33991 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
MCM4P33991 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
MCM4P33991 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
MCM4P33991 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
MCM4P33991 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
MCM4P33991 WHAMMP2-203ENST00000563942 1603 ntBASIC28.72■■■□□ 2.19
MCM4P33991 AL139125.2-201ENST00000623134 1869 ntBASIC28.72■■■□□ 2.19
MCM4P33991 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
MCM4P33991 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
MCM4P33991 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
MCM4P33991 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
MCM4P33991 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC28.71■■■□□ 2.19
MCM4P33991 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
MCM4P33991 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
MCM4P33991 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
MCM4P33991 AC133561.1-201ENST00000568600 2415 ntBASIC28.71■■■□□ 2.19
MCM4P33991 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
MCM4P33991 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
MCM4P33991 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.7■■■□□ 2.19
MCM4P33991 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
MCM4P33991 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
MCM4P33991 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
MCM4P33991 AC142472.1-201ENST00000612013 1741 ntBASIC28.7■■■□□ 2.19
MCM4P33991 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
MCM4P33991 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC28.69■■■□□ 2.18
MCM4P33991 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC28.69■■■□□ 2.18
MCM4P33991 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
MCM4P33991 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.69■■■□□ 2.18
MCM4P33991 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.69■■■□□ 2.18
MCM4P33991 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
MCM4P33991 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
MCM4P33991 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
MCM4P33991 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
MCM4P33991 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
MCM4P33991 AC138932.3-201ENST00000567634 1902 ntBASIC28.67■■■□□ 2.18
MCM4P33991 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
MCM4P33991 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC28.66■■■□□ 2.18
MCM4P33991 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
MCM4P33991 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
MCM4P33991 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
MCM4P33991 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.66■■■□□ 2.18
MCM4P33991 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
MCM4P33991 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
MCM4P33991 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
MCM4P33991 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
MCM4P33991 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
MCM4P33991 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.65■■■□□ 2.18
MCM4P33991 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.65■■■□□ 2.18
MCM4P33991 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
MCM4P33991 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
MCM4P33991 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
MCM4P33991 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
MCM4P33991 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
MCM4P33991 AC010501.1-201ENST00000606270 1962 ntBASIC28.63■■■□□ 2.17
MCM4P33991 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
MCM4P33991 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
MCM4P33991 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
MCM4P33991 ABHD17AP4-201ENST00000411545 909 ntBASIC28.62■■■□□ 2.17
MCM4P33991 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms