Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
GDF1P27539 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GDF1P27539 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.34■■□□□ 1.17
GDF1P27539 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
GDF1P27539 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
GDF1P27539 AC093536.1-201ENST00000569153 554 ntBASIC22.33■■□□□ 1.17
GDF1P27539 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
GDF1P27539 AC009831.1-201ENST00000580420 1582 ntBASIC22.33■■□□□ 1.16
GDF1P27539 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.33■■□□□ 1.16
GDF1P27539 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
GDF1P27539 KRT18P60-201ENST00000312876 1297 ntBASIC22.32■■□□□ 1.16
GDF1P27539 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.32■■□□□ 1.16
GDF1P27539 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
GDF1P27539 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
GDF1P27539 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
GDF1P27539 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
GDF1P27539 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
GDF1P27539 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.31■■□□□ 1.16
GDF1P27539 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
GDF1P27539 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
GDF1P27539 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.3■■□□□ 1.16
GDF1P27539 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GDF1P27539 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.29■■□□□ 1.16
GDF1P27539 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GDF1P27539 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
GDF1P27539 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
GDF1P27539 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.29■■□□□ 1.16
GDF1P27539 AC026202.3-201ENST00000600805 1127 ntBASIC22.29■■□□□ 1.16
GDF1P27539 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GDF1P27539 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.28■■□□□ 1.16
GDF1P27539 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
GDF1P27539 AL592293.1-201ENST00000502889 1188 ntBASIC22.28■■□□□ 1.16
GDF1P27539 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
GDF1P27539 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
GDF1P27539 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GDF1P27539 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.26■■□□□ 1.15
GDF1P27539 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GDF1P27539 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GDF1P27539 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GDF1P27539 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
GDF1P27539 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
GDF1P27539 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GDF1P27539 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
GDF1P27539 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GDF1P27539 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GDF1P27539 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
GDF1P27539 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
GDF1P27539 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
GDF1P27539 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.24■■□□□ 1.15
GDF1P27539 AL033527.3-201ENST00000566366 1196 ntBASIC22.24■■□□□ 1.15
GDF1P27539 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GDF1P27539 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
GDF1P27539 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GDF1P27539 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
GDF1P27539 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.23■■□□□ 1.15
GDF1P27539 RAP2CP1-202ENST00000605179 643 ntBASIC22.23■■□□□ 1.15
GDF1P27539 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GDF1P27539 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
GDF1P27539 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.22■■□□□ 1.15
GDF1P27539 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.22■■□□□ 1.15
GDF1P27539 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GDF1P27539 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GDF1P27539 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GDF1P27539 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
GDF1P27539 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
GDF1P27539 TSPY13P-201ENST00000338964 914 ntBASIC22.21■■□□□ 1.15
GDF1P27539 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
GDF1P27539 AC004987.1-201ENST00000428627 508 ntBASIC22.21■■□□□ 1.15
GDF1P27539 ATP5G2P3-201ENST00000429083 425 ntBASIC22.21■■□□□ 1.15
GDF1P27539 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
GDF1P27539 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.21■■□□□ 1.15
GDF1P27539 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.2■■□□□ 1.14
GDF1P27539 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
GDF1P27539 AC129492.7-201ENST00000622992 756 ntBASIC22.2■■□□□ 1.14
GDF1P27539 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
GDF1P27539 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GDF1P27539 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.19■■□□□ 1.14
GDF1P27539 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
GDF1P27539 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.19■■□□□ 1.14
GDF1P27539 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
GDF1P27539 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GDF1P27539 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GDF1P27539 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GDF1P27539 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GDF1P27539 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GDF1P27539 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
GDF1P27539 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
GDF1P27539 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.17■■□□□ 1.14
GDF1P27539 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.17■■□□□ 1.14
GDF1P27539 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
GDF1P27539 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.16■■□□□ 1.14
GDF1P27539 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
GDF1P27539 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
GDF1P27539 AC142472.1-201ENST00000612013 1741 ntBASIC22.16■■□□□ 1.14
GDF1P27539 AP004609.3-201ENST00000610705 1884 ntBASIC22.15■■□□□ 1.14
GDF1P27539 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
GDF1P27539 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
GDF1P27539 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.15■■□□□ 1.14
GDF1P27539 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
GDF1P27539 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms