Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.29■■□□□ 1
CD40P25942 BX255925.1-201ENST00000566954 1854 ntBASIC21.29■■□□□ 1
CD40P25942 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.29■■□□□ 1
CD40P25942 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CD40P25942 AL033527.3-201ENST00000566366 1196 ntBASIC21.29■■□□□ 1
CD40P25942 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CD40P25942 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CD40P25942 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD40P25942 AC142086.6-201ENST00000621154 1765 ntBASIC21.28■■□□□ 1
CD40P25942 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CD40P25942 AL449106.1-201ENST00000608517 1980 ntBASIC21.27■■□□□ 1
CD40P25942 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CD40P25942 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CD40P25942 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD40P25942 TSPY13P-201ENST00000338964 914 ntBASIC21.27■■□□□ 1
CD40P25942 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD40P25942 AC004987.1-201ENST00000428627 508 ntBASIC21.27■■□□□ 1
CD40P25942 ATP5G2P3-201ENST00000429083 425 ntBASIC21.27■■□□□ 1
CD40P25942 RAP2CP1-202ENST00000605179 643 ntBASIC21.27■■□□□ 1
CD40P25942 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CD40P25942 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CD40P25942 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
CD40P25942 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD40P25942 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
CD40P25942 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD40P25942 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CD40P25942 AC129492.7-201ENST00000622992 756 ntBASIC21.26■□□□□ 0.99
CD40P25942 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CD40P25942 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD40P25942 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CD40P25942 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.26■□□□□ 0.99
CD40P25942 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD40P25942 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.25■□□□□ 0.99
CD40P25942 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CD40P25942 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.25■□□□□ 0.99
CD40P25942 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD40P25942 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.24■□□□□ 0.99
CD40P25942 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CD40P25942 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CD40P25942 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD40P25942 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD40P25942 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CD40P25942 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.23■□□□□ 0.99
CD40P25942 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CD40P25942 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.23■□□□□ 0.99
CD40P25942 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.22■□□□□ 0.99
CD40P25942 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD40P25942 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CD40P25942 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD40P25942 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD40P25942 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CD40P25942 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD40P25942 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD40P25942 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CD40P25942 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.21■□□□□ 0.99
CD40P25942 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.21■□□□□ 0.99
CD40P25942 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD40P25942 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.21■□□□□ 0.99
CD40P25942 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD40P25942 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.21■□□□□ 0.99
CD40P25942 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CD40P25942 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD40P25942 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD40P25942 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD40P25942 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CD40P25942 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.19■□□□□ 0.98
CD40P25942 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CD40P25942 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD40P25942 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CD40P25942 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD40P25942 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD40P25942 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.17■□□□□ 0.98
CD40P25942 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
CD40P25942 DUX4L18-201ENST00000553347 1267 ntBASIC21.17■□□□□ 0.98
CD40P25942 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD40P25942 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD40P25942 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD40P25942 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CD40P25942 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD40P25942 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.16■□□□□ 0.98
CD40P25942 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CD40P25942 DUX4L9-201ENST00000449051 1259 ntBASIC21.16■□□□□ 0.98
CD40P25942 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.16■□□□□ 0.98
CD40P25942 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CD40P25942 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.15■□□□□ 0.98
CD40P25942 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD40P25942 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.15■□□□□ 0.98
CD40P25942 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
CD40P25942 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD40P25942 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD40P25942 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD40P25942 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CD40P25942 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD40P25942 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CD40P25942 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CD40P25942 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CD40P25942 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.13■□□□□ 0.97
CD40P25942 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD40P25942 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD40P25942 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms