Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.29■■□□□ 1
CD40P25942 BX255925.1-201ENST00000566954 1854 ntBASIC21.29■■□□□ 1
CD40P25942 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.29■■□□□ 1
CD40P25942 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CD40P25942 AL033527.3-201ENST00000566366 1196 ntBASIC21.29■■□□□ 1
CD40P25942 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CD40P25942 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CD40P25942 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD40P25942 AC142086.6-201ENST00000621154 1765 ntBASIC21.28■■□□□ 1
CD40P25942 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CD40P25942 AL449106.1-201ENST00000608517 1980 ntBASIC21.27■■□□□ 1
CD40P25942 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CD40P25942 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CD40P25942 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD40P25942 TSPY13P-201ENST00000338964 914 ntBASIC21.27■■□□□ 1
CD40P25942 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD40P25942 AC004987.1-201ENST00000428627 508 ntBASIC21.27■■□□□ 1
CD40P25942 ATP5G2P3-201ENST00000429083 425 ntBASIC21.27■■□□□ 1
CD40P25942 RAP2CP1-202ENST00000605179 643 ntBASIC21.27■■□□□ 1
CD40P25942 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CD40P25942 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CD40P25942 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
CD40P25942 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD40P25942 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
CD40P25942 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD40P25942 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CD40P25942 AC129492.7-201ENST00000622992 756 ntBASIC21.26■□□□□ 0.99
CD40P25942 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CD40P25942 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD40P25942 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CD40P25942 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.26■□□□□ 0.99
CD40P25942 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD40P25942 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.25■□□□□ 0.99
CD40P25942 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CD40P25942 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.25■□□□□ 0.99
CD40P25942 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD40P25942 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.24■□□□□ 0.99
CD40P25942 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CD40P25942 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CD40P25942 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD40P25942 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD40P25942 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CD40P25942 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.23■□□□□ 0.99
CD40P25942 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CD40P25942 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.23■□□□□ 0.99
CD40P25942 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.22■□□□□ 0.99
CD40P25942 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD40P25942 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CD40P25942 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD40P25942 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD40P25942 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CD40P25942 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD40P25942 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD40P25942 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CD40P25942 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.21■□□□□ 0.99
CD40P25942 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.21■□□□□ 0.99
CD40P25942 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD40P25942 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.21■□□□□ 0.99
CD40P25942 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD40P25942 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.21■□□□□ 0.99
CD40P25942 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CD40P25942 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD40P25942 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD40P25942 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD40P25942 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CD40P25942 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.19■□□□□ 0.98
CD40P25942 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CD40P25942 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD40P25942 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CD40P25942 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD40P25942 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD40P25942 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.17■□□□□ 0.98
CD40P25942 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
CD40P25942 DUX4L18-201ENST00000553347 1267 ntBASIC21.17■□□□□ 0.98
CD40P25942 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD40P25942 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD40P25942 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD40P25942 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CD40P25942 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD40P25942 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.16■□□□□ 0.98
CD40P25942 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CD40P25942 DUX4L9-201ENST00000449051 1259 ntBASIC21.16■□□□□ 0.98
CD40P25942 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.16■□□□□ 0.98
CD40P25942 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CD40P25942 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.15■□□□□ 0.98
CD40P25942 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD40P25942 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.15■□□□□ 0.98
CD40P25942 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
CD40P25942 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD40P25942 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD40P25942 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD40P25942 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CD40P25942 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD40P25942 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CD40P25942 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CD40P25942 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CD40P25942 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.13■□□□□ 0.97
CD40P25942 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD40P25942 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD40P25942 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 506.2 ms