Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.77■□□□□ 0.92
COL8A2P25067 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
COL8A2P25067 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL8A2P25067 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL8A2P25067 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
COL8A2P25067 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL8A2P25067 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL8A2P25067 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.77■□□□□ 0.91
COL8A2P25067 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COL8A2P25067 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL8A2P25067 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
COL8A2P25067 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COL8A2P25067 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL8A2P25067 ATP5G2P3-201ENST00000429083 425 ntBASIC20.76■□□□□ 0.91
COL8A2P25067 MIR3960-201ENST00000583311 91 ntBASIC20.76■□□□□ 0.91
COL8A2P25067 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.76■□□□□ 0.91
COL8A2P25067 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.75■□□□□ 0.91
COL8A2P25067 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL8A2P25067 TSPY13P-201ENST00000338964 914 ntBASIC20.75■□□□□ 0.91
COL8A2P25067 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
COL8A2P25067 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL8A2P25067 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
COL8A2P25067 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.74■□□□□ 0.91
COL8A2P25067 AC129492.7-201ENST00000622992 756 ntBASIC20.74■□□□□ 0.91
COL8A2P25067 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COL8A2P25067 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL8A2P25067 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL8A2P25067 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL8A2P25067 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL8A2P25067 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL8A2P25067 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COL8A2P25067 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.73■□□□□ 0.91
COL8A2P25067 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL8A2P25067 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL8A2P25067 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.72■□□□□ 0.91
COL8A2P25067 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.72■□□□□ 0.91
COL8A2P25067 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL8A2P25067 RAP2CP1-202ENST00000605179 643 ntBASIC20.72■□□□□ 0.91
COL8A2P25067 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL8A2P25067 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL8A2P25067 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL8A2P25067 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
COL8A2P25067 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
COL8A2P25067 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL8A2P25067 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL8A2P25067 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.71■□□□□ 0.91
COL8A2P25067 DUX4L18-201ENST00000553347 1267 ntBASIC20.71■□□□□ 0.91
COL8A2P25067 AL449106.1-201ENST00000608517 1980 ntBASIC20.71■□□□□ 0.91
COL8A2P25067 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL8A2P25067 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL8A2P25067 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL8A2P25067 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.7■□□□□ 0.9
COL8A2P25067 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL8A2P25067 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL8A2P25067 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
COL8A2P25067 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL8A2P25067 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL8A2P25067 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL8A2P25067 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL8A2P25067 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL8A2P25067 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL8A2P25067 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
COL8A2P25067 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL8A2P25067 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL8A2P25067 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL8A2P25067 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.68■□□□□ 0.9
COL8A2P25067 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL8A2P25067 BX255925.1-201ENST00000566954 1854 ntBASIC20.68■□□□□ 0.9
COL8A2P25067 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL8A2P25067 AC142086.6-201ENST00000621154 1765 ntBASIC20.67■□□□□ 0.9
COL8A2P25067 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL8A2P25067 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
COL8A2P25067 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL8A2P25067 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.66■□□□□ 0.9
COL8A2P25067 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
COL8A2P25067 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.66■□□□□ 0.9
COL8A2P25067 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.66■□□□□ 0.9
COL8A2P25067 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.66■□□□□ 0.9
COL8A2P25067 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL8A2P25067 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL8A2P25067 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
COL8A2P25067 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL8A2P25067 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL8A2P25067 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.64■□□□□ 0.9
COL8A2P25067 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
COL8A2P25067 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL8A2P25067 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL8A2P25067 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL8A2P25067 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.64■□□□□ 0.89
COL8A2P25067 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL8A2P25067 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
COL8A2P25067 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL8A2P25067 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL8A2P25067 DUX4L9-201ENST00000449051 1259 ntBASIC20.63■□□□□ 0.89
COL8A2P25067 SPCS2P3-201ENST00000500401 656 ntBASIC20.63■□□□□ 0.89
COL8A2P25067 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.63■□□□□ 0.89
COL8A2P25067 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
COL8A2P25067 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
COL8A2P25067 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL8A2P25067 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms