Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SNRPA1P09661 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.71■■■□□ 2.67
SNRPA1P09661 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.71■■■□□ 2.67
SNRPA1P09661 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SNRPA1P09661 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
SNRPA1P09661 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.69■■■□□ 2.66
SNRPA1P09661 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.69■■■□□ 2.66
SNRPA1P09661 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
SNRPA1P09661 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SNRPA1P09661 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SNRPA1P09661 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SNRPA1P09661 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SNRPA1P09661 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
SNRPA1P09661 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.68■■■□□ 2.66
SNRPA1P09661 MIR6765-201ENST00000614092 87 ntBASIC31.68■■■□□ 2.66
SNRPA1P09661 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SNRPA1P09661 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
SNRPA1P09661 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
SNRPA1P09661 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SNRPA1P09661 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SNRPA1P09661 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
SNRPA1P09661 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
SNRPA1P09661 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
SNRPA1P09661 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SNRPA1P09661 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
SNRPA1P09661 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
SNRPA1P09661 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.66■■■□□ 2.66
SNRPA1P09661 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.66■■■□□ 2.66
SNRPA1P09661 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.65■■■□□ 2.66
SNRPA1P09661 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
SNRPA1P09661 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.65■■■□□ 2.66
SNRPA1P09661 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
SNRPA1P09661 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
SNRPA1P09661 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.64■■■□□ 2.66
SNRPA1P09661 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SNRPA1P09661 AC018755.3-202ENST00000596210 929 ntBASIC31.64■■■□□ 2.66
SNRPA1P09661 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
SNRPA1P09661 BHLHE23-202ENST00000612929 1109 ntBASIC31.63■■■□□ 2.65
SNRPA1P09661 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SNRPA1P09661 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.63■■■□□ 2.65
SNRPA1P09661 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SNRPA1P09661 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SNRPA1P09661 AC074183.2-201ENST00000623112 922 ntBASIC31.62■■■□□ 2.65
SNRPA1P09661 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
SNRPA1P09661 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SNRPA1P09661 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.61■■■□□ 2.65
SNRPA1P09661 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SNRPA1P09661 AC010980.1-201ENST00000587192 1142 ntBASIC31.6■■■□□ 2.65
SNRPA1P09661 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
SNRPA1P09661 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SNRPA1P09661 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
SNRPA1P09661 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SNRPA1P09661 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.59■■■□□ 2.65
SNRPA1P09661 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.59■■■□□ 2.65
SNRPA1P09661 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SNRPA1P09661 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.58■■■□□ 2.65
SNRPA1P09661 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.58■■■□□ 2.65
SNRPA1P09661 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
SNRPA1P09661 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SNRPA1P09661 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.57■■■□□ 2.64
SNRPA1P09661 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SNRPA1P09661 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.56■■■□□ 2.64
SNRPA1P09661 LINC01003-201ENST00000564834 1764 ntBASIC31.56■■■□□ 2.64
SNRPA1P09661 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.56■■■□□ 2.64
SNRPA1P09661 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
SNRPA1P09661 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
SNRPA1P09661 AC139795.1-202ENST00000500444 432 ntBASIC31.55■■■□□ 2.64
SNRPA1P09661 AL449106.1-201ENST00000608517 1980 ntBASIC31.55■■■□□ 2.64
SNRPA1P09661 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SNRPA1P09661 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
SNRPA1P09661 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.54■■■□□ 2.64
SNRPA1P09661 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SNRPA1P09661 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SNRPA1P09661 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.54■■■□□ 2.64
SNRPA1P09661 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.53■■■□□ 2.64
SNRPA1P09661 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.53■■■□□ 2.64
SNRPA1P09661 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
SNRPA1P09661 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.52■■■□□ 2.64
SNRPA1P09661 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
SNRPA1P09661 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.52■■■□□ 2.64
SNRPA1P09661 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.52■■■□□ 2.64
SNRPA1P09661 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.52■■■□□ 2.64
SNRPA1P09661 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SNRPA1P09661 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.64
SNRPA1P09661 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.51■■■□□ 2.63
SNRPA1P09661 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
SNRPA1P09661 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.51■■■□□ 2.63
SNRPA1P09661 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SNRPA1P09661 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
SNRPA1P09661 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.5■■■□□ 2.63
SNRPA1P09661 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SNRPA1P09661 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.5■■■□□ 2.63
SNRPA1P09661 PVT1_1.1-201ENST00000615125 194 ntBASIC31.5■■■□□ 2.63
SNRPA1P09661 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
SNRPA1P09661 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SNRPA1P09661 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SNRPA1P09661 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
SNRPA1P09661 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.49■■■□□ 2.63
SNRPA1P09661 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
SNRPA1P09661 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms