Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GYPBP06028 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
GYPBP06028 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
GYPBP06028 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GYPBP06028 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.92■■□□□ 1.1
GYPBP06028 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GYPBP06028 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GYPBP06028 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
GYPBP06028 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
GYPBP06028 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GYPBP06028 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GYPBP06028 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
GYPBP06028 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GYPBP06028 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GYPBP06028 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GYPBP06028 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GYPBP06028 ERN1-208ENST00000606895 2068 ntBASIC21.89■■□□□ 1.1
GYPBP06028 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GYPBP06028 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GYPBP06028 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
GYPBP06028 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.89■■□□□ 1.09
GYPBP06028 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.89■■□□□ 1.09
GYPBP06028 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.89■■□□□ 1.09
GYPBP06028 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GYPBP06028 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GYPBP06028 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
GYPBP06028 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
GYPBP06028 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.88■■□□□ 1.09
GYPBP06028 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
GYPBP06028 LINC01971-201ENST00000617888 1048 ntBASIC21.88■■□□□ 1.09
GYPBP06028 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
GYPBP06028 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
GYPBP06028 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GYPBP06028 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GYPBP06028 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.87■■□□□ 1.09
GYPBP06028 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
GYPBP06028 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GYPBP06028 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.87■■□□□ 1.09
GYPBP06028 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GYPBP06028 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
GYPBP06028 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
GYPBP06028 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
GYPBP06028 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
GYPBP06028 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GYPBP06028 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.86■■□□□ 1.09
GYPBP06028 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.86■■□□□ 1.09
GYPBP06028 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.86■■□□□ 1.09
GYPBP06028 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GYPBP06028 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.86■■□□□ 1.09
GYPBP06028 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.85■■□□□ 1.09
GYPBP06028 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GYPBP06028 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
GYPBP06028 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GYPBP06028 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GYPBP06028 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GYPBP06028 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.85■■□□□ 1.09
GYPBP06028 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
GYPBP06028 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GYPBP06028 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GYPBP06028 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
GYPBP06028 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
GYPBP06028 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
GYPBP06028 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
GYPBP06028 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
GYPBP06028 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
GYPBP06028 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GYPBP06028 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GYPBP06028 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GYPBP06028 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GYPBP06028 DUX4L13-201ENST00000554103 1267 ntBASIC21.83■■□□□ 1.09
GYPBP06028 DUX4L15-201ENST00000611059 1267 ntBASIC21.83■■□□□ 1.09
GYPBP06028 DUX4L23-201ENST00000615195 1269 ntBASIC21.83■■□□□ 1.09
GYPBP06028 DUX4L24-201ENST00000617576 1269 ntBASIC21.83■■□□□ 1.09
GYPBP06028 DUX4L22-201ENST00000618238 1269 ntBASIC21.83■■□□□ 1.09
GYPBP06028 DUX4L20-201ENST00000619712 1269 ntBASIC21.83■■□□□ 1.09
GYPBP06028 DUX4L21-201ENST00000622058 1269 ntBASIC21.83■■□□□ 1.09
GYPBP06028 DUX4L10-201ENST00000622460 1267 ntBASIC21.83■■□□□ 1.09
GYPBP06028 DUX4L25-201ENST00000624915 1269 ntBASIC21.83■■□□□ 1.09
GYPBP06028 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GYPBP06028 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
GYPBP06028 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
GYPBP06028 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GYPBP06028 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GYPBP06028 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GYPBP06028 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GYPBP06028 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
GYPBP06028 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
GYPBP06028 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
GYPBP06028 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GYPBP06028 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.8■■□□□ 1.08
GYPBP06028 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GYPBP06028 AC010501.1-201ENST00000606270 1962 ntBASIC21.8■■□□□ 1.08
GYPBP06028 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.8■■□□□ 1.08
GYPBP06028 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GYPBP06028 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.8■■□□□ 1.08
GYPBP06028 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GYPBP06028 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GYPBP06028 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
GYPBP06028 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GYPBP06028 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms