Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LCATP04180 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LCATP04180 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LCATP04180 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LCATP04180 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LCATP04180 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LCATP04180 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LCATP04180 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LCATP04180 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LCATP04180 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LCATP04180 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
LCATP04180 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
LCATP04180 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LCATP04180 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LCATP04180 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.35■■□□□ 1.01
LCATP04180 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LCATP04180 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.34■■□□□ 1.01
LCATP04180 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.34■■□□□ 1.01
LCATP04180 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.34■■□□□ 1.01
LCATP04180 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LCATP04180 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.33■■□□□ 1.01
LCATP04180 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
LCATP04180 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LCATP04180 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
LCATP04180 AC126177.7-201ENST00000547904 679 ntBASIC21.33■■□□□ 1.01
LCATP04180 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LCATP04180 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.32■■□□□ 1
LCATP04180 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.32■■□□□ 1
LCATP04180 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.32■■□□□ 1
LCATP04180 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.32■■□□□ 1
LCATP04180 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.32■■□□□ 1
LCATP04180 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.31■■□□□ 1
LCATP04180 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LCATP04180 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LCATP04180 MIR639-201ENST00000384974 98 ntBASIC21.31■■□□□ 1
LCATP04180 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.31■■□□□ 1
LCATP04180 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.31■■□□□ 1
LCATP04180 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
LCATP04180 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.31■■□□□ 1
LCATP04180 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.31■■□□□ 1
LCATP04180 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.31■■□□□ 1
LCATP04180 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LCATP04180 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.31■■□□□ 1
LCATP04180 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
LCATP04180 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LCATP04180 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LCATP04180 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LCATP04180 AC091060.1-201ENST00000623524 1766 ntBASIC21.29■■□□□ 1
LCATP04180 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LCATP04180 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCATP04180 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCATP04180 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
LCATP04180 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCATP04180 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.28■■□□□ 1
LCATP04180 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.28■■□□□ 1
LCATP04180 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LCATP04180 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCATP04180 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCATP04180 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCATP04180 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LCATP04180 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCATP04180 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCATP04180 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCATP04180 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LCATP04180 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LCATP04180 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LCATP04180 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCATP04180 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCATP04180 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LCATP04180 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LCATP04180 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LCATP04180 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LCATP04180 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCATP04180 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCATP04180 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCATP04180 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.25■□□□□ 0.99
LCATP04180 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
LCATP04180 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCATP04180 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.24■□□□□ 0.99
LCATP04180 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.24■□□□□ 0.99
LCATP04180 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.24■□□□□ 0.99
LCATP04180 AL359504.2-201ENST00000605506 1601 ntBASIC21.24■□□□□ 0.99
LCATP04180 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LCATP04180 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCATP04180 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.23■□□□□ 0.99
LCATP04180 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCATP04180 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.23■□□□□ 0.99
LCATP04180 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.23■□□□□ 0.99
LCATP04180 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.23■□□□□ 0.99
LCATP04180 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.23■□□□□ 0.99
LCATP04180 AC092803.2-201ENST00000564287 1899 ntBASIC21.23■□□□□ 0.99
LCATP04180 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.23■□□□□ 0.99
LCATP04180 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.23■□□□□ 0.99
LCATP04180 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.22■□□□□ 0.99
LCATP04180 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LCATP04180 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
LCATP04180 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LCATP04180 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LCATP04180 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.22■□□□□ 0.99
LCATP04180 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms