Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRGV3P03979 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRGV3P03979 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV3P03979 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV3P03979 AP004609.3-201ENST00000610705 1884 ntBASIC19.23■□□□□ 0.67
TRGV3P03979 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV3P03979 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV3P03979 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.23■□□□□ 0.67
TRGV3P03979 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.23■□□□□ 0.67
TRGV3P03979 AL121749.1-202ENST00000609313 2153 ntBASIC19.23■□□□□ 0.67
TRGV3P03979 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV3P03979 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV3P03979 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV3P03979 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
TRGV3P03979 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV3P03979 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV3P03979 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
TRGV3P03979 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.21■□□□□ 0.67
TRGV3P03979 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRGV3P03979 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV3P03979 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.2■□□□□ 0.66
TRGV3P03979 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.2■□□□□ 0.66
TRGV3P03979 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.2■□□□□ 0.66
TRGV3P03979 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV3P03979 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.19■□□□□ 0.66
TRGV3P03979 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV3P03979 AC142472.1-201ENST00000612013 1741 ntBASIC19.19■□□□□ 0.66
TRGV3P03979 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV3P03979 AL359504.2-201ENST00000605506 1601 ntBASIC19.18■□□□□ 0.66
TRGV3P03979 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV3P03979 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRGV3P03979 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.18■□□□□ 0.66
TRGV3P03979 AL157400.5-201ENST00000507624 621 ntBASIC19.18■□□□□ 0.66
TRGV3P03979 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV3P03979 AC092296.2-201ENST00000589470 999 ntBASIC19.18■□□□□ 0.66
TRGV3P03979 HSD17B1P1-201ENST00000590052 955 ntBASIC19.18■□□□□ 0.66
TRGV3P03979 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV3P03979 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV3P03979 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.17■□□□□ 0.66
TRGV3P03979 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRGV3P03979 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRGV3P03979 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.17■□□□□ 0.66
TRGV3P03979 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRGV3P03979 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TRGV3P03979 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TRGV3P03979 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRGV3P03979 ECEL1P2-201ENST00000461596 1295 ntBASIC19.16■□□□□ 0.66
TRGV3P03979 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.16■□□□□ 0.66
TRGV3P03979 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRGV3P03979 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRGV3P03979 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRGV3P03979 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRGV3P03979 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.15■□□□□ 0.66
TRGV3P03979 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRGV3P03979 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.15■□□□□ 0.66
TRGV3P03979 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRGV3P03979 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRGV3P03979 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.15■□□□□ 0.66
TRGV3P03979 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRGV3P03979 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRGV3P03979 RNF126P1-201ENST00000567452 1320 ntBASIC19.14■□□□□ 0.65
TRGV3P03979 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.14■□□□□ 0.65
TRGV3P03979 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRGV3P03979 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.13■□□□□ 0.65
TRGV3P03979 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRGV3P03979 SMPD5-203ENST00000639008 1464 ntBASIC19.13■□□□□ 0.65
TRGV3P03979 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRGV3P03979 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRGV3P03979 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRGV3P03979 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TRGV3P03979 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRGV3P03979 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRGV3P03979 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRGV3P03979 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRGV3P03979 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TRGV3P03979 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRGV3P03979 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.11■□□□□ 0.65
TRGV3P03979 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRGV3P03979 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRGV3P03979 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.11■□□□□ 0.65
TRGV3P03979 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRGV3P03979 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRGV3P03979 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRGV3P03979 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRGV3P03979 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
TRGV3P03979 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRGV3P03979 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRGV3P03979 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRGV3P03979 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.09■□□□□ 0.65
TRGV3P03979 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TRGV3P03979 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.09■□□□□ 0.65
TRGV3P03979 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.09■□□□□ 0.65
TRGV3P03979 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRGV3P03979 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRGV3P03979 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRGV3P03979 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
TRGV3P03979 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TRGV3P03979 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRGV3P03979 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRGV3P03979 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms