Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SOD1P00441 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.37■■□□□ 1.49
SOD1P00441 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.36■■□□□ 1.49
SOD1P00441 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SOD1P00441 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
SOD1P00441 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SOD1P00441 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SOD1P00441 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
SOD1P00441 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
SOD1P00441 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SOD1P00441 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
SOD1P00441 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
SOD1P00441 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.35■■□□□ 1.49
SOD1P00441 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SOD1P00441 RP9P-202ENST00000450133 1212 ntBASIC24.35■■□□□ 1.49
SOD1P00441 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.35■■□□□ 1.49
SOD1P00441 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
SOD1P00441 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SOD1P00441 AC009831.1-201ENST00000580420 1582 ntBASIC24.34■■□□□ 1.49
SOD1P00441 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.34■■□□□ 1.49
SOD1P00441 MIR3960-201ENST00000583311 91 ntBASIC24.34■■□□□ 1.49
SOD1P00441 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
SOD1P00441 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SOD1P00441 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
SOD1P00441 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.33■■□□□ 1.49
SOD1P00441 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
SOD1P00441 AC026202.3-201ENST00000600805 1127 ntBASIC24.33■■□□□ 1.49
SOD1P00441 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
SOD1P00441 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SOD1P00441 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
SOD1P00441 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
SOD1P00441 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SOD1P00441 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SOD1P00441 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SOD1P00441 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.32■■□□□ 1.48
SOD1P00441 AC093536.1-201ENST00000569153 554 ntBASIC24.32■■□□□ 1.48
SOD1P00441 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SOD1P00441 AC142472.1-201ENST00000612013 1741 ntBASIC24.32■■□□□ 1.48
SOD1P00441 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SOD1P00441 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
SOD1P00441 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.31■■□□□ 1.48
SOD1P00441 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SOD1P00441 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.31■■□□□ 1.48
SOD1P00441 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
SOD1P00441 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SOD1P00441 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.31■■□□□ 1.48
SOD1P00441 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
SOD1P00441 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SOD1P00441 KRT18P60-201ENST00000312876 1297 ntBASIC24.3■■□□□ 1.48
SOD1P00441 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SOD1P00441 RAP2CP1-202ENST00000605179 643 ntBASIC24.3■■□□□ 1.48
SOD1P00441 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.29■■□□□ 1.48
SOD1P00441 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SOD1P00441 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.29■■□□□ 1.48
SOD1P00441 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SOD1P00441 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.29■■□□□ 1.48
SOD1P00441 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SOD1P00441 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SOD1P00441 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SOD1P00441 AP004609.3-201ENST00000610705 1884 ntBASIC24.29■■□□□ 1.48
SOD1P00441 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.29■■□□□ 1.48
SOD1P00441 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SOD1P00441 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SOD1P00441 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
SOD1P00441 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.28■■□□□ 1.48
SOD1P00441 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SOD1P00441 AC133552.2-201ENST00000619106 1032 ntBASIC24.28■■□□□ 1.48
SOD1P00441 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.28■■□□□ 1.48
SOD1P00441 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SOD1P00441 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SOD1P00441 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SOD1P00441 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SOD1P00441 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.27■■□□□ 1.48
SOD1P00441 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
SOD1P00441 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
SOD1P00441 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SOD1P00441 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SOD1P00441 AL592293.1-201ENST00000502889 1188 ntBASIC24.26■■□□□ 1.47
SOD1P00441 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.26■■□□□ 1.47
SOD1P00441 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SOD1P00441 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
SOD1P00441 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.25■■□□□ 1.47
SOD1P00441 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SOD1P00441 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SOD1P00441 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SOD1P00441 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SOD1P00441 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SOD1P00441 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SOD1P00441 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SOD1P00441 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SOD1P00441 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SOD1P00441 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.23■■□□□ 1.47
SOD1P00441 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SOD1P00441 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SOD1P00441 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.22■■□□□ 1.47
SOD1P00441 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.22■■□□□ 1.47
SOD1P00441 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SOD1P00441 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
SOD1P00441 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.2■■□□□ 1.47
SOD1P00441 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms