Protein–RNA interactions for Protein: P00414

MT-CO3, Cytochrome c oxidase subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO3P00414 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MT-CO3P00414 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
MT-CO3P00414 AL031848.2-201ENST00000607670 837 ntBASIC23.66■■□□□ 1.38
MT-CO3P00414 AL359504.2-201ENST00000605506 1601 ntBASIC23.66■■□□□ 1.38
MT-CO3P00414 AL139393.2-201ENST00000608721 2025 ntBASIC23.66■■□□□ 1.38
MT-CO3P00414 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MT-CO3P00414 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.65■■□□□ 1.38
MT-CO3P00414 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
MT-CO3P00414 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
MT-CO3P00414 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.65■■□□□ 1.38
MT-CO3P00414 AC103724.3-201ENST00000564481 992 ntBASIC23.65■■□□□ 1.38
MT-CO3P00414 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
MT-CO3P00414 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
MT-CO3P00414 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.64■■□□□ 1.37
MT-CO3P00414 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
MT-CO3P00414 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
MT-CO3P00414 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
MT-CO3P00414 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
MT-CO3P00414 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.62■■□□□ 1.37
MT-CO3P00414 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
MT-CO3P00414 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.62■■□□□ 1.37
MT-CO3P00414 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
MT-CO3P00414 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MT-CO3P00414 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MT-CO3P00414 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.61■■□□□ 1.37
MT-CO3P00414 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
MT-CO3P00414 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-CO3P00414 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-CO3P00414 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-CO3P00414 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.6■■□□□ 1.37
MT-CO3P00414 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MT-CO3P00414 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.6■■□□□ 1.37
MT-CO3P00414 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
MT-CO3P00414 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MT-CO3P00414 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MT-CO3P00414 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MT-CO3P00414 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MT-CO3P00414 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MT-CO3P00414 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
MT-CO3P00414 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
MT-CO3P00414 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
MT-CO3P00414 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
MT-CO3P00414 AL356441.2-201ENST00000443009 864 ntBASIC23.58■■□□□ 1.37
MT-CO3P00414 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.58■■□□□ 1.37
MT-CO3P00414 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
MT-CO3P00414 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
MT-CO3P00414 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.58■■□□□ 1.37
MT-CO3P00414 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
MT-CO3P00414 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
MT-CO3P00414 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
MT-CO3P00414 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MT-CO3P00414 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.57■■□□□ 1.36
MT-CO3P00414 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MT-CO3P00414 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
MT-CO3P00414 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.56■■□□□ 1.36
MT-CO3P00414 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.56■■□□□ 1.36
MT-CO3P00414 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.56■■□□□ 1.36
MT-CO3P00414 AC019171.1-201ENST00000601251 1056 ntBASIC23.56■■□□□ 1.36
MT-CO3P00414 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
MT-CO3P00414 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
MT-CO3P00414 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.55■■□□□ 1.36
MT-CO3P00414 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.55■■□□□ 1.36
MT-CO3P00414 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
MT-CO3P00414 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.54■■□□□ 1.36
MT-CO3P00414 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.53■■□□□ 1.36
MT-CO3P00414 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.53■■□□□ 1.36
MT-CO3P00414 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MT-CO3P00414 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.53■■□□□ 1.36
MT-CO3P00414 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MT-CO3P00414 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MT-CO3P00414 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MT-CO3P00414 AC239859.2-201ENST00000444165 318 ntBASIC23.52■■□□□ 1.36
MT-CO3P00414 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
MT-CO3P00414 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
MT-CO3P00414 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MT-CO3P00414 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
MT-CO3P00414 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
MT-CO3P00414 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.51■■□□□ 1.35
MT-CO3P00414 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.51■■□□□ 1.35
MT-CO3P00414 AC087393.1-201ENST00000582896 145 ntBASIC23.51■■□□□ 1.35
MT-CO3P00414 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.51■■□□□ 1.35
MT-CO3P00414 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
MT-CO3P00414 WHAMMP3-201ENST00000611636 1609 ntBASIC23.51■■□□□ 1.35
MT-CO3P00414 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MT-CO3P00414 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
MT-CO3P00414 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MT-CO3P00414 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MT-CO3P00414 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.5■■□□□ 1.35
MT-CO3P00414 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
MT-CO3P00414 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
MT-CO3P00414 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
MT-CO3P00414 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
MT-CO3P00414 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
MT-CO3P00414 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
MT-CO3P00414 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
MT-CO3P00414 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.49■■□□□ 1.35
MT-CO3P00414 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.49■■□□□ 1.35
MT-CO3P00414 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
MT-CO3P00414 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.48■■□□□ 1.35
MT-CO3P00414 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms