Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.27■■□□□ 1.32
FOXS1O43638 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXS1O43638 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
FOXS1O43638 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
FOXS1O43638 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
FOXS1O43638 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXS1O43638 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
FOXS1O43638 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXS1O43638 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXS1O43638 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FOXS1O43638 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FOXS1O43638 RP9P-202ENST00000450133 1212 ntBASIC23.25■■□□□ 1.31
FOXS1O43638 NTF6A-201ENST00000591175 560 ntBASIC23.25■■□□□ 1.31
FOXS1O43638 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.25■■□□□ 1.31
FOXS1O43638 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXS1O43638 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
FOXS1O43638 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.24■■□□□ 1.31
FOXS1O43638 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
FOXS1O43638 MIR3960-201ENST00000583311 91 ntBASIC23.24■■□□□ 1.31
FOXS1O43638 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
FOXS1O43638 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FOXS1O43638 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FOXS1O43638 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
FOXS1O43638 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
FOXS1O43638 AC142472.1-201ENST00000612013 1741 ntBASIC23.23■■□□□ 1.31
FOXS1O43638 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.23■■□□□ 1.31
FOXS1O43638 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
FOXS1O43638 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
FOXS1O43638 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.23■■□□□ 1.31
FOXS1O43638 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FOXS1O43638 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
FOXS1O43638 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
FOXS1O43638 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
FOXS1O43638 AC093536.1-201ENST00000569153 554 ntBASIC23.22■■□□□ 1.31
FOXS1O43638 AC026202.3-201ENST00000600805 1127 ntBASIC23.22■■□□□ 1.31
FOXS1O43638 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
FOXS1O43638 AC009831.1-201ENST00000580420 1582 ntBASIC23.22■■□□□ 1.31
FOXS1O43638 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
FOXS1O43638 AP004609.3-201ENST00000610705 1884 ntBASIC23.22■■□□□ 1.31
FOXS1O43638 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.21■■□□□ 1.31
FOXS1O43638 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
FOXS1O43638 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
FOXS1O43638 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.21■■□□□ 1.31
FOXS1O43638 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FOXS1O43638 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FOXS1O43638 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.2■■□□□ 1.3
FOXS1O43638 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
FOXS1O43638 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
FOXS1O43638 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.2■■□□□ 1.3
FOXS1O43638 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.19■■□□□ 1.3
FOXS1O43638 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.19■■□□□ 1.3
FOXS1O43638 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FOXS1O43638 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.19■■□□□ 1.3
FOXS1O43638 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOXS1O43638 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.19■■□□□ 1.3
FOXS1O43638 AC133552.2-201ENST00000619106 1032 ntBASIC23.19■■□□□ 1.3
FOXS1O43638 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
FOXS1O43638 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
FOXS1O43638 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXS1O43638 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FOXS1O43638 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FOXS1O43638 RAP2CP1-202ENST00000605179 643 ntBASIC23.18■■□□□ 1.3
FOXS1O43638 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXS1O43638 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXS1O43638 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
FOXS1O43638 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FOXS1O43638 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXS1O43638 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXS1O43638 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXS1O43638 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXS1O43638 KRT18P60-201ENST00000312876 1297 ntBASIC23.16■■□□□ 1.3
FOXS1O43638 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.16■■□□□ 1.3
FOXS1O43638 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.16■■□□□ 1.3
FOXS1O43638 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXS1O43638 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
FOXS1O43638 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXS1O43638 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FOXS1O43638 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.15■■□□□ 1.3
FOXS1O43638 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXS1O43638 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FOXS1O43638 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.15■■□□□ 1.3
FOXS1O43638 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
FOXS1O43638 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
FOXS1O43638 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
FOXS1O43638 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
FOXS1O43638 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
FOXS1O43638 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
FOXS1O43638 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
FOXS1O43638 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
FOXS1O43638 AL592293.1-201ENST00000502889 1188 ntBASIC23.14■■□□□ 1.29
FOXS1O43638 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
FOXS1O43638 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
FOXS1O43638 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
FOXS1O43638 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.14■■□□□ 1.29
FOXS1O43638 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
FOXS1O43638 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
FOXS1O43638 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
FOXS1O43638 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXS1O43638 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.13■■□□□ 1.29
FOXS1O43638 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms