Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AP004609.3-201ENST00000610705 1884 ntBASIC30.65■■■□□ 2.5
SRGAP3O43295 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SRGAP3O43295 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.65■■■□□ 2.5
SRGAP3O43295 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SRGAP3O43295 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
SRGAP3O43295 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
SRGAP3O43295 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
SRGAP3O43295 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
SRGAP3O43295 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.63■■■□□ 2.49
SRGAP3O43295 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
SRGAP3O43295 AL121749.1-202ENST00000609313 2153 ntBASIC30.62■■■□□ 2.49
SRGAP3O43295 AC142472.1-201ENST00000612013 1741 ntBASIC30.62■■■□□ 2.49
SRGAP3O43295 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.62■■■□□ 2.49
SRGAP3O43295 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.62■■■□□ 2.49
SRGAP3O43295 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.62■■■□□ 2.49
SRGAP3O43295 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.61■■■□□ 2.49
SRGAP3O43295 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.61■■■□□ 2.49
SRGAP3O43295 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SRGAP3O43295 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.6■■■□□ 2.49
SRGAP3O43295 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.59■■■□□ 2.49
SRGAP3O43295 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SRGAP3O43295 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SRGAP3O43295 AC007029.1-201ENST00000604183 313 ntBASIC30.59■■■□□ 2.49
SRGAP3O43295 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SRGAP3O43295 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SRGAP3O43295 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SRGAP3O43295 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.58■■■□□ 2.49
SRGAP3O43295 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
SRGAP3O43295 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.57■■■□□ 2.48
SRGAP3O43295 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SRGAP3O43295 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.57■■■□□ 2.48
SRGAP3O43295 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SRGAP3O43295 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
SRGAP3O43295 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SRGAP3O43295 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SRGAP3O43295 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
SRGAP3O43295 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SRGAP3O43295 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SRGAP3O43295 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.55■■■□□ 2.48
SRGAP3O43295 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SRGAP3O43295 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.55■■■□□ 2.48
SRGAP3O43295 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SRGAP3O43295 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SRGAP3O43295 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
SRGAP3O43295 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
SRGAP3O43295 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
SRGAP3O43295 ABHD17AP5-201ENST00000580133 923 ntBASIC30.54■■■□□ 2.48
SRGAP3O43295 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SRGAP3O43295 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.53■■■□□ 2.48
SRGAP3O43295 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.53■■■□□ 2.48
SRGAP3O43295 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SRGAP3O43295 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SRGAP3O43295 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SRGAP3O43295 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
SRGAP3O43295 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
SRGAP3O43295 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
SRGAP3O43295 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
SRGAP3O43295 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
SRGAP3O43295 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
SRGAP3O43295 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.5■■■□□ 2.47
SRGAP3O43295 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.5■■■□□ 2.47
SRGAP3O43295 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.5■■■□□ 2.47
SRGAP3O43295 MIR3960-201ENST00000583311 91 ntBASIC30.5■■■□□ 2.47
SRGAP3O43295 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.49■■■□□ 2.47
SRGAP3O43295 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.49■■■□□ 2.47
SRGAP3O43295 RP9P-202ENST00000450133 1212 ntBASIC30.49■■■□□ 2.47
SRGAP3O43295 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SRGAP3O43295 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SRGAP3O43295 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
SRGAP3O43295 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SRGAP3O43295 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.48■■■□□ 2.47
SRGAP3O43295 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.48■■■□□ 2.47
SRGAP3O43295 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
SRGAP3O43295 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.48■■■□□ 2.47
SRGAP3O43295 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
SRGAP3O43295 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SRGAP3O43295 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SRGAP3O43295 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SRGAP3O43295 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SRGAP3O43295 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.46■■■□□ 2.47
SRGAP3O43295 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SRGAP3O43295 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
SRGAP3O43295 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
SRGAP3O43295 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SRGAP3O43295 AC093536.1-201ENST00000569153 554 ntBASIC30.45■■■□□ 2.47
SRGAP3O43295 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
SRGAP3O43295 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SRGAP3O43295 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
SRGAP3O43295 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SRGAP3O43295 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
SRGAP3O43295 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.44■■■□□ 2.46
SRGAP3O43295 U85056.1-201ENST00000616429 682 ntBASIC30.44■■■□□ 2.46
SRGAP3O43295 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SRGAP3O43295 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SRGAP3O43295 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
SRGAP3O43295 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.43■■■□□ 2.46
SRGAP3O43295 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.43■■■□□ 2.46
SRGAP3O43295 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.43■■■□□ 2.46
SRGAP3O43295 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC30.42■■■□□ 2.46
SRGAP3O43295 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms