Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TNFSF11O14788 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
TNFSF11O14788 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
TNFSF11O14788 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.09■■□□□ 1.13
TNFSF11O14788 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TNFSF11O14788 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TNFSF11O14788 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.08■■□□□ 1.13
TNFSF11O14788 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.08■■□□□ 1.13
TNFSF11O14788 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
TNFSF11O14788 AP004609.3-201ENST00000610705 1884 ntBASIC22.08■■□□□ 1.13
TNFSF11O14788 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TNFSF11O14788 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TNFSF11O14788 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TNFSF11O14788 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TNFSF11O14788 AC025884.2-201ENST00000553429 711 ntBASIC22.07■■□□□ 1.12
TNFSF11O14788 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.07■■□□□ 1.12
TNFSF11O14788 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TNFSF11O14788 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.06■■□□□ 1.12
TNFSF11O14788 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TNFSF11O14788 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TNFSF11O14788 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.05■■□□□ 1.12
TNFSF11O14788 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TNFSF11O14788 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.05■■□□□ 1.12
TNFSF11O14788 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
TNFSF11O14788 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TNFSF11O14788 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.04■■□□□ 1.12
TNFSF11O14788 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TNFSF11O14788 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TNFSF11O14788 AC142472.1-201ENST00000612013 1741 ntBASIC22.04■■□□□ 1.12
TNFSF11O14788 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TNFSF11O14788 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.04■■□□□ 1.12
TNFSF11O14788 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.04■■□□□ 1.12
TNFSF11O14788 ABHD17AP5-201ENST00000580133 923 ntBASIC22.04■■□□□ 1.12
TNFSF11O14788 AC007029.1-201ENST00000604183 313 ntBASIC22.04■■□□□ 1.12
TNFSF11O14788 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TNFSF11O14788 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
TNFSF11O14788 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TNFSF11O14788 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TNFSF11O14788 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TNFSF11O14788 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TNFSF11O14788 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TNFSF11O14788 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
TNFSF11O14788 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TNFSF11O14788 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TNFSF11O14788 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.01■■□□□ 1.11
TNFSF11O14788 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.01■■□□□ 1.11
TNFSF11O14788 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TNFSF11O14788 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22■■□□□ 1.11
TNFSF11O14788 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TNFSF11O14788 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TNFSF11O14788 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TNFSF11O14788 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22■■□□□ 1.11
TNFSF11O14788 MIR3960-201ENST00000583311 91 ntBASIC22■■□□□ 1.11
TNFSF11O14788 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TNFSF11O14788 AL121749.1-202ENST00000609313 2153 ntBASIC21.99■■□□□ 1.11
TNFSF11O14788 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFSF11O14788 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.99■■□□□ 1.11
TNFSF11O14788 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
TNFSF11O14788 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TNFSF11O14788 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.99■■□□□ 1.11
TNFSF11O14788 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.99■■□□□ 1.11
TNFSF11O14788 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TNFSF11O14788 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TNFSF11O14788 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFSF11O14788 RP9P-202ENST00000450133 1212 ntBASIC21.98■■□□□ 1.11
TNFSF11O14788 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.97■■□□□ 1.11
TNFSF11O14788 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TNFSF11O14788 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TNFSF11O14788 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.97■■□□□ 1.11
TNFSF11O14788 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
TNFSF11O14788 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.96■■□□□ 1.11
TNFSF11O14788 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TNFSF11O14788 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TNFSF11O14788 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TNFSF11O14788 AC093536.1-201ENST00000569153 554 ntBASIC21.96■■□□□ 1.11
TNFSF11O14788 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.96■■□□□ 1.11
TNFSF11O14788 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
TNFSF11O14788 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TNFSF11O14788 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
TNFSF11O14788 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TNFSF11O14788 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TNFSF11O14788 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TNFSF11O14788 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.95■■□□□ 1.1
TNFSF11O14788 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.95■■□□□ 1.1
TNFSF11O14788 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.95■■□□□ 1.1
TNFSF11O14788 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFSF11O14788 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
TNFSF11O14788 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFSF11O14788 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TNFSF11O14788 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TNFSF11O14788 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TNFSF11O14788 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
TNFSF11O14788 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFSF11O14788 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TNFSF11O14788 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNFSF11O14788 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNFSF11O14788 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TNFSF11O14788 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
TNFSF11O14788 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.93■■□□□ 1.1
TNFSF11O14788 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms